Methanosarcina barkeri 3: MSBR3_3447
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Entry
MSBR3_3447 CDS
T04533
Name
(GenBank) Eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
mbak
Methanosarcina barkeri 3
Pathway
mbak03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mbak00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MSBR3_3447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbak03019
]
MSBR3_3447
03012 Translation factors [BR:
mbak03012
]
MSBR3_3447
Messenger RNA biogenesis [BR:
mbak03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MSBR3_3447
Translation factors [BR:
mbak03012
]
Eukaryotic type
Release factors
MSBR3_3447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Zn_ribbon_LysW
Vps36-NZF-N
Zn_ribbon_DUF2089
Zn_ribbon_3
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
AKB84025
UniProt:
A0A0E3WY69
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Position
complement(4522421..4523668)
Genome browser
AA seq
415 aa
AA seq
DB search
MTEQSAHEKYEFKKKLESLRDKKGRSTELISLYIPPDKQIFDVTNQLKDEHGQAANIKSK
LTRTNVQGAIESLLSRLRYLDKVPENGIVYFTGAVDIGANKTNMESEVIVPPEPITVYKY
HCDSSFYLEPLEDMLKDKGTFGLLVLDRREATVGLLVGKRIQAFRNLTSTVPGKQRKGGQ
SSHRFQQLRLIAIHEFYKRIGDAASEIFLAVEPKDLKGILIGGPSPTKEEFYAGEFLHHE
LMRKILGLFDTAYTDESGLSELVNAAGDKLQDLELMGQKNAVRAFFKELISDSGKVAYGE
TQVRANLEINAVDMLLLSEDLRAERVTTSCSVCGYENKWTRRWKPGESAPTTGNCPNCGA
SLEVTDVTDIVDELSALADKSNAKVVFVSTDFDEGSQLMNAFGGIAAILRYSTGV
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaatctgcacacgaaaagtacgaatttaaaaagaagcttgaaagcctgagg
gataaaaagggaagaagtactgaactgatttctctttatatcccgcctgacaagcaaatt
tttgacgttacaaaccagttaaaagacgagcacggacaggctgcaaatatcaagtccaag
cttaccaggactaacgtacagggagccattgaatctctcctttcaaggctcagatatctt
gacaaggttcctgaaaacgggatcgtttatttcacaggggccgtggatattggggccaac
aagacgaacatggagagcgaagtaattgtccctccggaacccattactgtttataagtat
cactgcgactcctctttctatcttgagcccctggaggatatgctcaaggataagggtacg
tttggacttctggtgcttgaccgcagggaagccacagtagggcttcttgtcggaaaacgg
atccaggccttccgcaaccttacctcaaccgttccgggaaaacagaggaaaggtggtcag
agttctcatcgtttccagcaactcaggttaattgctatccatgagttctataaaaggata
ggagacgccgcaagtgaaattttccttgctgttgagcctaaagatctcaaaggtatcctg
ataggaggcccttctcctacgaaggaagaattttatgccggggagttcttgcatcacgag
cttatgagaaaaattcttgggctctttgatacggcttacactgacgagtccgggctctcg
gaacttgtgaatgctgccggagataagttacaggatcttgagcttatggggcagaagaat
gctgtcagagccttctttaaagaacttatttccgactcaggcaaagtagcctatggagaa
acacaggttagggcaaaccttgaaatcaatgctgtggacatgcttctgctttccgaagat
ctgcgggctgaaagagtaaccactagttgcagcgtttgcggatatgaaaataagtggaca
cggcgatggaaacccggagaatctgcccctacaacgggtaactgtccaaactgtggagct
tcccttgaagttacggacgttactgacattgttgacgagctttcagcccttgctgacaaa
agcaacgcaaaagttgttttcgtatctactgattttgacgaagggtcacaacttatgaac
gctttcggaggcattgctgcaattctcaggtatagtactggagtctga
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