Methanosarcina barkeri 227: MSBR2_0382
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Entry
MSBR2_0382 CDS
T03914
Name
(GenBank) Shwachman-Bodian-Diamond syndrome protein
KO
K14574
ribosome maturation protein SDO1
Organism
mbar
Methanosarcina barkeri 227
Pathway
mbar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mbar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MSBR2_0382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mbar03009
]
MSBR2_0382
Ribosome biogenesis [BR:
mbar03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
MSBR2_0382
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
EFG_C
Motif
Other DBs
NCBI-ProteinID:
AKB56898
UniProt:
A0A0E3R0R0
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All DBs
Position
480715..481407
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AA seq
230 aa
AA seq
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MVSLDEAVTARLKRGSKHFEVLVEPEGALAYKRGEDVNLEDILAVETIFEDANRGDRAAE
SDILNSFETTDPFKIAAVILKSGELQLTAEQRKRMLEEKKKKVIYTISRNAINPQTKAPH
PPARIEKAMEEAKVHIDPLKSVDQLVKITMKAIRPLIPIRFEEVNIAVKIPPEYAPKAYG
DISKIGSITKEEWQRDGSWIAVVRIPAGVQTDLYALINHLTKGEAQTKLL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccctggacgaggcagtgactgcgcggcttaagagaggcagcaaacacttcgaa
gtcctggtcgagcccgaaggagctctggcctataagcgaggagaagacgtaaaccttgaa
gatattctggcggttgaaactatcttcgaagacgcaaaccgaggggaccgagcagcagag
tccgatattctcaattcttttgagacaacggatcccttcaagattgctgccgtgatcctg
aaaagtggggagcttcagctcactgctgaacagagaaaacgcatgcttgaggaaaaaaag
aaaaaagttatttataccatttccaggaatgcaataaatccccagacaaaagcacctcat
cctcccgcaaggatcgaaaaggcgatggaagaggcaaaggtgcacatagaccccttaaaa
agtgtggatcagctggtcaaaatcacaatgaaagccattcgcccgcttatacctatacgc
tttgaagaggtcaatattgctgtgaaaatccctcccgaatatgctcccaaagcatacgga
gatatttccaagataggaagcattacgaaagaagaatggcagcgtgatggctcctggatt
gcggtggtaagaatcccggcaggagtacagactgatctttacgctcttataaatcatctt
acgaagggagaggctcaaactaaacttttataa
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