Methanosarcina barkeri 227: MSBR2_1146
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Entry
MSBR2_1146 CDS
T03914
Name
(GenBank) Putative ski2-type helicase
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
mbar
Methanosarcina barkeri 227
Brite
KEGG Orthology (KO) [BR:
mbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbar03400
]
MSBR2_1146
Enzymes [BR:
mbar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSBR2_1146
DNA repair and recombination proteins [BR:
mbar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
MSBR2_1146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_dom4_arc
DEAD
HHH_5
ResIII
Helicase_C
DEXQc_Suv3
HTH_61
DNA_pol_lambd_f
IMS_HHH_1
Cdd1
DUF4189
Motif
Other DBs
NCBI-ProteinID:
AKB57662
UniProt:
A0A0E3R269
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All DBs
Position
1459780..1461969
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AA seq
729 aa
AA seq
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MKIESLDLPDEVKQFYLDSGIMELYPPQAEAVEKGLLKGRNLLAAIPTASGKTLLAELAM
LKSILAGGKALYIVPLRALASEKFRRFREFSELGIRVGISTGDYDLRDEGLGVNDIIVAT
SEKTDSLLRNETVWMQEISVVVADEVHLIDSPDRGPTLEVTLAKLRKMNPSCQILALSAT
VGNADELAAWLEAELVVSEWRPTELLEGVFFNGTFYCKDREKAVEQPTKDNAVNLALDTL
KKGGQCLVFESSRKNCMAFAKKAASTVKKILSAEDRNVLAGIADEILENSETDTSTNLAA
CIRSGTAFHHAGLTTPLRELVEDGFRAGKIKLISSTPTLAAGLNLPARRVIIRNYRRYSS
EDGMQPIPVLEYKQMAGRAGRPRLDPYGEAVLVAKSYKEFVFLFENYIEANAEDIWSKLG
TENALRTHVLSTISNGFARTYDELMDFLEATFFAFQYSNFGLSTVVKECLNFLRQEGMLE
KDDDLIPTSFGKLVSRLYIDPLSATRIARGLKETKSLSELTLLHLVCSTPDMRLLYMRSH
DYQGINDYVMAHASEFVKVPSPFDTTEYEWFLGEVKTSLLLLDWVHEKSENEICLKFGTG
EGDIHSIADIAEWIMHVTSQLAGLLDLKGAKEAAELEKRIHYGAAPELMDLLNIRGIGRV
RARKLYEAGFKSSAELAGVDPEKVAALLGPKIADRIFKQIRSKGAFSGIIESKPPEKSPY
SGQKTISDY
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagaaagtcttgatctgcccgatgaagtaaagcagttttatctcgattccgga
attatggaactttatccccctcaggccgaagccgtggaaaaagggctgcttaaaggaaga
aacctgcttgctgcaatccctacagcttcagggaagactctccttgccgagcttgcaatg
ttgaaatccatccttgcaggaggaaaagcactctatatcgtgcctcttagagctcttgct
tccgagaaattcaggcgttttcgggagttttcagaacttggaataagggtagggatctct
acaggggactatgacctgcgggacgagggactcggagtaaacgacattattgttgcaacc
tccgagaaaaccgattctctgctcagaaacgagaccgtctggatgcaggaaatttcggtt
gttgtggcagacgaggtgcatctgatagactcgccggacaggggcccaacgcttgaggtt
acccttgcaaagcttcggaaaatgaacccttcctgccagatccttgcattatctgcaact
gtcgggaatgccgacgaactcgcagcctggctggaagccgagcttgtagtaagtgaatgg
aggcctactgagcttcttgaaggagtattctttaatgggaccttctattgcaaagatagg
gaaaaagctgttgagcagcccacaaaagacaatgctgtaaaccttgcgctggataccctc
aaaaaaggcggacaatgcctggttttcgaaagcagcagaaaaaactgcatggcttttgca
aaaaaagcagcttcaactgttaaaaagatactctcagccgaagacagaaatgtacttgca
ggaattgcagacgagatccttgaaaacagtgaaaccgatacttcaacgaaccttgcagct
tgtattcgttcaggcacggcttttcaccatgcaggtcttaccacgcctttaagagaactt
gtggaggacggtttcagggctggaaagataaagttgatttcgagcacgcctacccttgca
gccgggcttaacctgcctgcacggcgtgtaattatccgaaattatcgacgctattcctct
gaagacggaatgcagcctattcctgtgctcgagtacaaacagatggcaggcagggcaggc
aggccaaggcttgacccatacggagaagctgtacttgttgcaaaatcatataaggagttt
gttttcctttttgaaaactatatcgaagccaacgccgaagatatctggtccaagctcgga
accgaaaatgctctcaggacccatgtgctctctacgatctctaacggttttgcgcggaca
tatgatgaactcatggattttcttgaagcaacatttttcgcttttcagtactcgaacttc
gggctttctacggttgtaaaagaatgccttaactttttgcgtcaggaagggatgcttgag
aaagacgatgaccttattcctacaagcttcggaaagcttgtttcaagactctatatcgac
cccctgtcagccaccaggattgcaaggggcctgaaagagacaaagagcctgagtgagctt
actctgctgcatctggtgtgcagcacacctgacatgcgcctgctttacatgcggagccat
gattatcagggtatcaatgattatgtaatggctcatgcgagcgagtttgtaaaggtgccc
agtcccttcgatactacggaatatgaatggttccttggggaagtcaagacttccctcctt
ctgcttgactgggtccatgaaaaatctgaaaacgaaatttgcttaaagtttggcaccggg
gaaggtgacattcattcaattgcggatattgcagaatggataatgcacgtcacctctcaa
cttgccgggctccttgacctcaaaggtgcaaaagaagccgcagaacttgaaaagaggata
cattacggagcagcccctgaacttatggatctgctcaatatcagaggtatagggcgcgtg
agagcaaggaaactctatgaggcaggcttcaaatcctcagcagagcttgcaggagttgat
cctgagaaagttgctgctcttcttgggccaaaaattgcagaccggattttcaagcagatc
aggagcaaaggagcattttctggaattattgagtctaagcctcctgagaaaagtccgtat
tcagggcaaaaaacaattagtgattattga
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