Methanosarcina barkeri 227: MSBR2_1316
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Entry
MSBR2_1316 CDS
T03914
Name
(GenBank) Dipeptide transport ATP-binding protein DppD
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
mbar
Methanosarcina barkeri 227
Pathway
mbar02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mbar00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MSBR2_1316
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mbar02000
]
MSBR2_1316
Transporters [BR:
mbar02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
MSBR2_1316
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
AAA_29
nSTAND3
AAA_16
DUF87
AAA_23
NB-ARC
AAA_25
NACHT
RsgA_GTPase
Mg_chelatase
PRK
AAA_33
Zeta_toxin
Rad17
NPHP3_N
RNA_helicase
DO-GTPase2
TIP49
MMR_HSR1
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AKB57832
UniProt:
A0A0E3R2W6
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Position
complement(1684467..1686188)
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AA seq
573 aa
AA seq
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MNLLKINDLKCHYLTDVDTIKAVDGISFEIKEGEILGIVGESGSGKTTVALVIMGLLPEN
TAISGEILYRDELISSLPEPEMNKFRWKDIAIVFQNSLEVLNPVMKVGIQAMEPMIKHLD
ISPEKAQSKCADLFRTVGLDPKWMDSYPHQLSGGMRQRVLLAMALSCDPKLLILDEVTSS
LDAFTRKEIRDLLVDLQKNNRYTMLMISHDITFVSSVASRIAVMYSGRVVETGPVRDILV
SPRHPYTRGLVHSTPDIFVYKDLWGIPGDAPAGDGFKGCPFSPRCTQKIDICSKVSPVLT
PIGDGREIACHRGGIADVLVAKNLRFRYRLPNKEYLQAVDNVNLEVREGEVLAIVGQTGS
GKSTLAHILANVIRPECGEVLFMGRNVVGESYGSRFNGIQIVFQDPFNSTSNRFTVLDAI
KEPLYINNIGSNGDRLQMVKSALELVRLPSTDNFLSKYCGELSGGQRQRVALARAMVMEP
KLLIADEITSALDVSTSANILRLLKGLQNRRGFAMIYISHDLSLTLKIADRIAVMNSGKI
VEMGNSHDVMLSPSDEYTKRLVGSRIGLCCHTH
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgcttaaaatcaatgatcttaaatgccactatctaactgacgttgataccatt
aaggctgttgatggtatttcttttgagattaaagaaggagaaattctgggtattgttgga
gaatccggcagtggtaagaccaccgttgccctcgtgattatggggctattaccggaaaat
acagctatttccggggaaattctttacagggatgagctaatctcatctttgcctgaacct
gaaatgaacaaattcagatggaaggatattgcaatagtttttcagaatagccttgaggtg
ctgaaccctgttatgaaagtgggcattcaggcaatggaaccgatgataaagcaccttgat
atcagccctgagaaagcacagagtaaatgtgcggatctgttcaggacggttggccttgat
cctaaatggatggattcatatccgcatcagctatccggaggtatgaggcagagggttctt
ctggcgatggctctttcatgcgacccgaaattgctgattctcgatgaagttacttcttcc
cttgatgcatttacccgtaaggaaatcagagaccttcttgtcgaccttcagaagaataac
aggtatacgatgttaatgatctctcatgatatcacttttgtatcttctgtggcatccagg
attgctgttatgtattcaggaagggttgttgaaaccgggcctgtaagggatattcttgta
tctccccgtcatccttatacaaggggccttgtccactcgaccccggatatttttgtttat
aaagatttatggggaattcccggcgatgcacctgcaggggacggatttaagggctgtcct
ttcagcccgagatgtacacaaaaaatcgatatctgcagtaaagtttccccggttctgacg
ccgataggagatggaagggaaattgcatgccatagaggaggtatagcagacgttctggtg
gctaaaaacctgcgtttcagatatcgtctacctaataaagaatatcttcaggcagttgat
aatgttaatctggaagtgagggaaggagaggttcttgcaattgtcggccagactggttcg
ggaaagtcaacacttgcacatatccttgcaaatgtaattaggcccgagtgtggagaggta
ttgtttatgggcaggaatgttgtcggggaaagctatggaagcaggttcaatggcattcaa
atagtattccaggacccattcaattcaaccagcaacaggtttactgtgcttgatgcaatc
aaggagcctctttatatcaataatatcgggtccaatggagatagactgcaaatggttaaa
agtgcccttgaacttgttcgtcttcccagtactgacaatttcctcagcaaatattgcggt
gaactcagcggcgggcagaggcagagagttgcacttgcaagagcaatggttatggaacca
aaacttcttattgccgatgagataacgtcggctctggatgtttcaacctctgcaaatata
ttgcgtctgctaaagggccttcagaacaggagagggtttgcaatgatatatatttcacat
gatctttccctgacactgaagattgctgataggatagccgttatgaattccggaaagatt
gtcgagatggggaattcccacgacgttatgctctcaccttctgatgagtacacaaaaaga
cttgtgggttcaagaatcggactgtgctgtcatactcattaa
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