Methanosarcina barkeri 227: MSBR2_1500
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Entry
MSBR2_1500 CDS
T03914
Name
(GenBank) Translation elongation factor 1 alpha subunit
KO
K03231
elongation factor 1-alpha
Organism
mbar
Methanosarcina barkeri 227
Pathway
mbar03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mbar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MSBR2_1500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbar03019
]
MSBR2_1500
03016 Transfer RNA biogenesis [BR:
mbar03016
]
MSBR2_1500
03012 Translation factors [BR:
mbar03012
]
MSBR2_1500
04131 Membrane trafficking [BR:
mbar04131
]
MSBR2_1500
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mbar04147
]
MSBR2_1500
Messenger RNA biogenesis [BR:
mbar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
MSBR2_1500
Transfer RNA biogenesis [BR:
mbar03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
MSBR2_1500
Translation factors [BR:
mbar03012
]
Eukaryotic type
Elongation factors
MSBR2_1500
Membrane trafficking [BR:
mbar04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
MSBR2_1500
Exosome [BR:
mbar04147
]
Exosomal proteins
Proteins found in most exosomes
MSBR2_1500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Septin
EF-G_D2
NTP_transf_3
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
AKB58016
UniProt:
A0A0E3LQC2
LinkDB
All DBs
Position
complement(1946716..1947984)
Genome browser
AA seq
422 aa
AA seq
DB search
MASDKPHMNLAVIGHIDHGKSTFVGRLMYEAGAVPAHVIEKYKEEAKQKGKESFAFAWVM
DSLKEERERGITIDIAHKRFDTDKFYFTVVDCPGHRDFVKNMITGASQADAAVLVVAAPD
GVMAQTKEHIFLSRTLGINQLIVAVNKMDAVEYSEKRYKEVVEQVSGILKMIGFKPSDIP
FVPTSAFYGDNVVNHSEKTPWYKGVTMMEALNNLKVPEKPSTLPLRIPVEDAYTISGIGT
VPVGRVETGTMKKGDKVVFMPGGASGEVKSIEMHHEEIPQALPGDNIGWNVRGIGKADVR
RGDVCGHTDNPPKVADTFVGQIVVLQHPSAITAGYTPVFHAHTSQIACQLIELNKKLDPK
TGQVKEENPTFLKAGDAAVVTIKPTKPMVIEPVKEIPQLGRFAIRDMGMTIAAGMCMSVK
QK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgataaaccgcacatgaacttagcagtgattggtcacattgaccacggaaaa
tcaacatttgtaggacgcttaatgtacgaagcaggagctgtacctgcacacgttatcgag
aagtataaggaagaagcaaagcagaagggcaaggaatccttcgccttcgcatgggttatg
gactctcttaaggaagagcgtgaaagaggtatcacaattgacatcgctcacaagagattt
gacacagataagttctacttcacagtagtagactgtccaggccaccgtgacttcgtaaag
aacatgatcacaggtgcttcccaggctgacgccgctgtccttgttgttgcagctcctgac
ggtgtaatggcccagactaaggaacacattttcctttccagaactcttggtatcaaccag
cttattgttgcagtcaacaagatggatgcagttgaatacagcgagaagagatacaaggaa
gttgtcgagcaggtctccggtatccttaagatgatcgggttcaagccaagtgatattcca
tttgtcccaacctctgcattctacggcgacaatgttgtaaatcacagtgaaaagaccccc
tggtataagggagtaactatgatggaagctcttaacaacctcaaagtgccagaaaaacca
tccacccttcctctcaggatccctgtggaagatgcatacacaatttccggtatcggaacc
gtgcctgtaggcagagtcgaaaccggtaccatgaagaagggcgacaaggtagtcttcatg
ccaggcggagcatccggtgaagttaagtccattgagatgcaccatgaagaaattccacag
gcccttccaggagacaacattggctggaacgttcgtggtatcggcaaggccgatgtccgc
agaggagacgtttgtggccatactgacaacccaccaaaagtagctgatacgtttgtagga
cagattgtcgttctgcagcacccatccgcaatcactgccggatacactcctgttttccac
gcccacacttcccagatcgcatgccagctgatcgagcttaacaagaagctggacccgaag
accgggcaggtaaaggaagaaaacccgaccttccttaaggccggagatgcagcagtcgtt
accatcaaaccaacaaagccgatggttatcgagccagtaaaagaaattccacagctcggc
aggttcgctatccgtgatatgggtatgacaattgccgccggcatgtgtatgagtgttaaa
cagaagtaa
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