Methanosarcina barkeri 227: MSBR2_1509
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Entry
MSBR2_1509 CDS
T03914
Name
(GenBank) DNA-directed RNA polymerase subunit B''
KO
K03045
DNA-directed RNA polymerase subunit B" [EC:
2.7.7.6
]
Organism
mbar
Methanosarcina barkeri 227
Pathway
mbar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mbar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSBR2_1509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbar03021
]
MSBR2_1509
Enzymes [BR:
mbar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSBR2_1509
Transcription machinery [BR:
mbar03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSBR2_1509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
Motif
Other DBs
NCBI-ProteinID:
AKB58025
UniProt:
A0A0E3R3E0
LinkDB
All DBs
Position
complement(1958439..1960034)
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AA seq
531 aa
AA seq
DB search
MQHHIDSFNKFIDYGLQKIIDEQRTIETDIEDTYLKLGKIRVEHPVVKEADGAIEKLYPN
EARLRNLSYSGPLYLEMSVVKEGVESEVMEAKIGQLPIMVKSKICNLPGLSESEKVRYGE
DPLDPGGYFIIGGTERVVMTLEDLAPNKILVEYGERYGDTIEVAKVFSQKRGYRALVIVE
RGRKSLLEVSFPSISGRVYFITLMRALGIVTDEDIVNAVSSDPEIIKFMLENLEEAEVET
QEEAIEKIGARVAAGQAKEYQIKRANYVIDRYLFPHLGNDMKDRLSKAHFLARMAESCFE
LALGKRSEDDKDHYANKRLKLAGDLMEDLFRVSFNRLARDIKYQLERANMRNRELNVATI
VRADVLTDRLQHPLATGNWVGGRTGVSQLLDRNDYISTLSHLRRVISPLSRAQPHFEARD
LHATQWGRLCPSETPEGPNCGLVKNFAEMVELSTGIEDIDGIKKILHDLNVERAVVKVPE
LPAKMKETLLDEFGEEIVEEYEEPSEGESKYKDDEFYDYSDSDDGGSMFGD
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcaccatatagactcgtttaacaagtttatagattacgggctgcaaaaaatcata
gatgaacagagaacaatagaaaccgatatcgaggatacctaccttaaacttggaaaaatc
agggtagaacatcctgtggtaaaggaagccgacggggcaatcgaaaaactttatcccaac
gaggcaaggctcagaaacctttcatactcaggtcctctctacctcgaaatgagcgtggta
aaagaaggagttgagtctgaagtaatggaagcaaaaataggacagcttcctatcatggtc
aaatccaagatctgtaaccttccaggacttagtgaatccgaaaaagtccgctatggtgaa
gatccccttgaccctgggggatatttcattattggcggtaccgaaagggtggttatgacc
ctggaagacctcgcccctaacaagattctcgtagagtatggggagaggtatggcgatact
atagaggttgcaaaggttttctcacagaagcgcggatacagagcccttgtaatcgtagaa
agaggaagaaaatccttgctcgaggtttcttttccttctatctccggaagagtatacttc
attactttgatgagagctcttggaattgtaactgatgaagatatcgtaaatgcagtttca
agtgatcccgaaattatcaaattcatgctggaaaacctcgaagaagccgaagttgaaacc
caggaagaagcaatcgagaaaatcggggcccgggtcgctgcaggtcaggccaaggaatac
cagataaaaagagcaaactatgttattgacaggtacctgttcccccatcttggaaacgac
atgaaagacaggctttccaaggctcacttcctggcaagaatggctgagtcctgtttcgag
ctggcccttggaaagcgttcggaagacgataaagaccactatgcgaacaaaaggctgaaa
ctagctggagacctgatggaagacctcttcagggtatctttcaacaggcttgcaagagac
ataaaataccagctcgaacgcgcaaacatgagaaacagggagttgaatgtcgcaacaata
gttagagccgatgtgttgactgaccggctgcagcatccgctggcaaccggaaactgggtt
ggaggaagaacaggtgtgtctcagctccttgacagaaatgactatatttccacgctttcc
cacctgcgccgggtaatttcgcccctttcacgagcccagcctcactttgaggctcgagac
ctgcatgcaacccagtggggaaggctctgtccttcggaaactcctgaaggtccaaactgt
ggtctggtgaaaaactttgccgagatggtcgaactttcaacaggtatagaagacatcgac
gggataaagaaaattctccacgacctgaatgttgagcgtgcggttgtaaaggtaccggaa
ctcccggccaaaatgaaagaaaccttacttgatgagttcggagaagagattgttgaagaa
tatgaagagccttcggaaggcgaaagcaaatacaaagatgatgagttttacgattactca
gattcggatgatggcggatcaatgttcggtgattaa
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