Methanosarcina barkeri 227: MSBR2_1809
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Entry
MSBR2_1809 CDS
T03914
Name
(GenBank) tRNA-intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mbar
Methanosarcina barkeri 227
Brite
KEGG Orthology (KO) [BR:
mbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mbar03016
]
MSBR2_1809
Enzymes [BR:
mbar01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
MSBR2_1809
Transfer RNA biogenesis [BR:
mbar03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
MSBR2_1809
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Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Motif
Other DBs
NCBI-ProteinID:
AKB58325
UniProt:
A0A0E3R493
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Position
2367544..2368593
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AA seq
349 aa
AA seq
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MKTQLKGDRVLAGKEAVAELYKTGYFGRPKGEGLELSLVEAAFLLSRGKLEIELGTLLDF
RTFFEQASLRQPNFELKYIVYKDLKERGYYVQPSAADFRVYPRGSHPGKNAANIFVHVQS
ERQLLPVKLLQDSVTSAENVHKQFILAVVDEESDLTFYEVKTAVPKGEMPEPYPTIKTDA
TFLEDRVIAWDSQASETLYKSGFYGKMLDSERLQLSLVESLYLFSRGIITVRDRKGKVFS
FDEFVEKASEIESFFLRKYSAYKNLRDSGHVVKTGFKFGTNFRVYRKVESIEKIPHSEYL
VNAIPADFEFRLSVMSGAVRLANSVRKKMLFAVEKGEEIEYLDISRTKM
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacacaacttaaaggagaccgggtccttgccggaaaggaagcggtagccgaactt
tataaaactggttacttcgggcgtcctaaaggcgaagggcttgaactctcgcttgtagaa
gctgcttttcttctgtccagaggaaaactcgagatcgaacttggcacactgctcgatttt
agaacctttttcgaacaggcctctttgaggcagccgaattttgagctgaaatatatagtt
tataaggaccttaaagaaagagggtactatgtccagccatcagctgcagatttccgggtg
tatcccagaggcagccacccgggtaaaaatgcagcaaatatttttgttcatgtccagtct
gaaagacagctccttcctgtaaaacttcttcaggactcagttacctcggcagagaacgtg
cataagcagtttatccttgctgtggtggatgaagaaagtgaccttaccttctatgaggtt
aaaaccgcagttcccaaaggagaaatgcctgagccatatcctaccatcaaaaccgatgcc
actttcctagaagacagggtaatagcctgggattctcaggcttcggaaactctctataaa
agtggcttttacggaaaaatgctggactccgagaggttgcagctttccctggtcgaatca
ctttacctcttttccagaggcataataacggttcgggacaggaaaggtaaagtgttttca
tttgacgaatttgtcgagaaagcctcggagattgaaagctttttcctgagaaagtacagt
gcatataaaaatctcagggattcggggcatgtggtcaaaaccggttttaaattcgggaca
aatttcagggtataccgaaaggtagagtcaatagagaaaattcctcattcggaatacctt
gtaaatgccatccctgcggattttgagttcaggctttcagttatgtctggagctgtcagg
cttgcaaacagcgtcaggaaaaaaatgctttttgcagttgagaaaggtgaggaaatcgag
tacctagatatcagccggacgaagatgtaa
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