KEGG   Methanosarcina barkeri 227: MSBR2_2265
Entry
MSBR2_2265        CDS       T03914                                 
Name
(GenBank) DNA polymerase sliding clamp protein PCNA
  KO
K04802  proliferating cell nuclear antigen
Organism
mbar  Methanosarcina barkeri 227
Pathway
mbar03030  DNA replication
mbar03410  Base excision repair
mbar03420  Nucleotide excision repair
mbar03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mbar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSBR2_2265
   03410 Base excision repair
    MSBR2_2265
   03420 Nucleotide excision repair
    MSBR2_2265
   03430 Mismatch repair
    MSBR2_2265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mbar03032]
    MSBR2_2265
   03400 DNA repair and recombination proteins [BR:mbar03400]
    MSBR2_2265
DNA replication proteins [BR:mbar03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MSBR2_2265
DNA repair and recombination proteins [BR:mbar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MSBR2_2265
   MMR (mismatch excision repair)
    Other MMR factors
     MSBR2_2265
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    MSBR2_2265
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad9 Rad1
Other DBs
NCBI-ProteinID: AKB58781
UniProt: A0A0E3LQS5
LinkDB
Position
2962276..2963013
AA seq 245 aa
MFKAAINAELLKDAVAALAVIVDEVRFKINPEGISVKAVDPANVAMGIFELGSSAFDEYN
ADECEIGVDLNKITDLLGIADKNDTVRMELEEENHKLLIDVGGLSYTLSLLDPSTIRAEP
RVPQLELPAKVVLNGADLRRAVKAAEKISDHMLMGVSDDTFYMEAKGDTDQVRLEMGRDQ
LIDLKAGEACSLFSLDYLTDIVKPTNKVNEVTLSLGKDFPILIDFEIANGSGRISYLLAP
RIESD
NT seq 738 nt   +upstreamnt  +downstreamnt
atgtttaaggcagcaattaatgcagagcttctgaaagacgcggttgccgcactagctgta
attgtagatgaggtcagattcaaaataaaccctgaaggtatttcggtaaaagccgttgat
cctgccaatgttgcaatgggaattttcgagcttggatcatctgctttcgacgagtataac
gctgatgaatgtgaaatcggagtcgacctgaacaagattacagacctactgggaattgcg
gataagaatgacacagtccggatggaacttgaggaagaaaatcacaaactcctgattgat
gtcggagggctgtcttatacactttctcttctcgatccttctacgattcgagcagaacca
agagttccacaactcgaattgcctgccaaagtagtccttaacggtgcagacctcagacgt
gctgttaaagctgccgaaaaaataagtgaccatatgcttatgggagtttcggacgataca
ttctatatggaagcaaaaggcgataccgatcaggtccgtctcgaaatgggtagggatcag
ctaatcgatctgaaagcaggcgaagcatgttctctgttctctctggattatctgaccgat
atagttaaacccacaaacaaagtcaatgaagttactctctcccttggaaaagacttccca
atactcatagatttcgaaattgcgaatggttcaggaaggatttcttacctcctggctcca
agaattgagtcggactga

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