Methanosarcina barkeri 227: MSBR2_3054
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Entry
MSBR2_3054 CDS
T03914
Name
(GenBank) Deoxyribodipyrimidine photolyase, type II
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mbar
Methanosarcina barkeri 227
Brite
KEGG Orthology (KO) [BR:
mbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbar03400
]
MSBR2_3054
Enzymes [BR:
mbar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
MSBR2_3054
DNA repair and recombination proteins [BR:
mbar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
MSBR2_3054
Prokaryotic type
MSBR2_3054
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AKB59570
UniProt:
A0A0E3R4N7
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All DBs
Position
complement(3936473..3937795)
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AA seq
440 aa
AA seq
DB search
MGRDQRVEDNWALLFARKIALEADVPFFVVFCLVDGFLGAIRRQYEFMLRGLQEVEATLA
RKKIPFFFLRGDPEEEIPYFIEKHEIGTLVTDFSPLRIKRTWTKKVASGIKVPFFEVDAH
NVVPCWEASKKQEYAAHTFRPKLLKLLPEFLTEYPELEANLEFPEIVMISGKSETFSEVQ
KSGFETRLPGEFLKEKAGFLPDIALFEAGETAARKVMAEFLTNKLDSYSTLRNDPTKDAL
SNLSPYLHFGQISAQRVALKVEKAKADLKSKRVFLDELLVRKELADNFCYYNPFYDSFDG
FPEWAKKTLNSHRHDQKSHVFTLEKLETGRTYDPLWNASQIELLSRGKMHSYMRMYWAKK
ILEWSESPEKALETAIYLNDKYELDGRDPNGYAGIAWSIGGVHDRAWKEREIFGKIRYMS
YEGSNRKFDVKSYIEKYSAL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggccgtgaccagagggttgaggacaactgggctcttctttttgcccgaaaaatagcg
ttggaagccgatgtgcctttttttgtggtcttttgtctggtagatggatttctgggagct
ataagaagacaatatgagtttatgctcagagggctgcaggaagttgaagctacccttgca
aggaaaaaaattccattctttttccttcgaggagaccctgaagaagaaattccatatttt
attgagaaacatgagattggaactcttgttactgattttagtccacttaggattaagagg
acatggacaaaaaaagtcgcatcaggcattaaggtacccttctttgaggtggatgctcat
aacgtagttccctgctgggaagcttctaaaaagcaggaatatgctgcccatactttccgt
cctaagctcttaaagctccttcctgaattccttacggagtatcctgagcttgaagcaaat
ctcgaatttcctgaaatcgtcatgatatccggaaaatctgaaacgttttcagaagttcaa
aaaagtggatttgaaactcgtcttccaggggagtttcttaaagaaaaagccggtttctta
cctgatatcgcgcttttcgaagctggagaaacagctgcacgaaaagttatggctgaattt
ctcactaataaacttgactcttactccaccctgcgaaatgacccaactaaagatgcctta
tccaatctctctccttatctgcattttggacagatctcggctcaaagggtagctctcaaa
gtagaaaaagcaaaagctgacttgaaatcaaaaagagtatttctcgatgagctccttgtg
cgtaaagagcttgccgataatttctgctattataatcctttttatgatagttttgatggc
tttcctgaatgggcaaagaaaacccttaattctcacaggcatgatcaaaaaagtcatgtc
tttacattggaaaaactggaaacaggaaggacatacgatcctctctggaacgccagccag
atagaacttcttagtagagggaaaatgcacagctatatgcggatgtactgggcaaagaag
attctcgaatggagtgaatcgcccgaaaaagccctcgagactgcaatctacctaaatgat
aaatacgaattggacggacgagacccgaatggatatgcaggaattgcctggagtatcggg
ggagttcatgaccgcgcctggaaggaaagggaaatttttggaaaaataagatacatgagt
tatgagggtagtaatagaaagttcgacgttaaatcatatattgaaaaatattcagctttg
tag
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