Methanosarcina barkeri 227: MSBR2_3111
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Entry
MSBR2_3111 CDS
T03914
Name
(GenBank) Iron-dependent repressor IdeR/DtxR
KO
K03709
DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
Organism
mbar
Methanosarcina barkeri 227
Brite
KEGG Orthology (KO) [BR:
mbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mbar03000
]
MSBR2_3111
Transcription factors [BR:
mbar03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSBR2_3111
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fe_dep_repr_C
Fe_dep_repress
FeoA
MarR
HTH_5
HTH_24
HTH_11
Rrf2
TrmB
MarR_2
PH0730-like_N
HTH_IclR
WHD_HrcA
HTH_Crp_2
HTH_PafC
GntR
LexA_DNA_bind
HTH_27
WHD_RNase_R
HTH_micro
HTH_Cmi2_C
Rio2_N
DUF2250
wHTH-PRTase_assc
HTH_45
HTH_AsnC-type
GerE
HVO_A0261_N
TFIIE_alpha
HTH_6
HTH_10
HTH_1
DUF7343
DnaD_N
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AKB59627
UniProt:
A0A0E3R4S6
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Position
4003577..4004242
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AA seq
221 aa
AA seq
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MHIDRFEEYLETILYLIRKNQSPAKTKQISEELNVSPPSVTEMIKKLHSSGLVEYTPYQG
VELTKKGTDQAIKIKRKHQVLETFLVDVLDFDRKEAHKEACELEHAVSDAVLEKIYEFLG
CPEYCPDGNPINIDKNNIVQEEEFVPLDEMEEGSSGRVVRVTLPRETKERLISLGILAGE
DIKVRRKQKQGCISVIAVGSEIALGKDIAKKIFIAPKGRNV
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgcacatagatcgattcgaagaatatcttgaaactattctctacctcattagaaaaaat
cagagccctgcaaagaccaaacagatctctgaagaactcaacgtatctccgccgagcgtg
acggaaatgataaaaaagttacactcttcgggacttgtagagtatacaccttatcaggga
gttgaattaacaaaaaaaggaactgatcaggctataaaaatcaaaaggaaacaccaggta
cttgaaacttttctggttgatgtccttgatttcgataggaaggaagcccataaagaagcc
tgtgaacttgagcatgcggtatcagatgccgtacttgaaaagatctacgaatttctggga
tgcccagagtattgccctgacgggaaccctatcaatattgataaaaataatatcgtgcaa
gaggaagaatttgtcccacttgatgagatggaagaaggaagttcaggcagagttgtccgg
gtgactcttccaagagagacaaaagaacgcctgatctcccttggcattcttgcgggagaa
gatattaaagtcaggcgaaagcaaaaacagggctgcatctcggttatagcagtagggtcg
gaaattgctctcggaaaggatattgcaaagaaaattttcatagctccgaagggcagaaac
gtgtaa
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