Methanosarcina barkeri 227: MSBR2_3439
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Entry
MSBR2_3439 CDS
T03914
Name
(GenBank) Eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
mbar
Methanosarcina barkeri 227
Pathway
mbar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mbar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MSBR2_3439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbar03019
]
MSBR2_3439
03012 Translation factors [BR:
mbar03012
]
MSBR2_3439
Messenger RNA biogenesis [BR:
mbar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MSBR2_3439
Translation factors [BR:
mbar03012
]
Eukaryotic type
Release factors
MSBR2_3439
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Zn_ribbon_LysW
Vps36-NZF-N
Zn_ribbon_DUF2089
HypA
Zn_ribbon_3
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
AKB59955
UniProt:
A0A0E3R8C0
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Position
complement(4409513..4410760)
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AA seq
415 aa
AA seq
DB search
MTEQSAHEKYEFKKKLESLRDKKGRSTELISLYIPADKQIFDVTNQLKDEHGQAANIKSK
LTRTNVQGAIESLLSRLRYLDKVPENGIVYFTGAIDIGANKTNMESEVIVPPEPITVYKY
HCDSSFYLEPLEDMLKDKGTFGLLVLDRREATVGLLVGKRIEAFRNLTSTVPGKQRKGGQ
SSHRFQQLRLIAIHEFYKRIGDAADDIFLAVEPKDLKGILIGGPSPTKEEFYAGEFLHHE
LMRKILGLFDTAYTDESGLSELVNAAADKLQDLELMGQKNAVRAFFKELISDSGKVAYGE
TQVRANLEINAVDVLLLSEDLRAERVTTKCSVCGYENKWTRRWKPGESAPTAGNCPNCGA
SLEVTDVTDIVDELSALADRSNAKVVFVSTDFDEGSQLMNAFGGIAAILRYSTGV
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaatctgcacacgaaaagtacgaatttaaaaagaagcttgagagcctgagg
gataaaaagggaaggagtactgaactgatttctctttatatccctgctgacaagcagatt
tttgatgttacaaaccagttgaaagacgagcatggacaggctgcaaatatcaagtccaaa
cttaccaggactaatgtccagggggccattgaatctctcctttcaaggctcagatatctt
gacaaggttcctgaaaacggaatcgtttatttcacaggagccatagatatcggggctaac
aagacgaacatggagagcgaagtaattgtccctccagaaccaattactgtctataaatat
cattgcgactcctctttctatcttgagcctctggaggatatgctcaaggataagggcact
tttggacttttagtgcttgaccgcagggaagccacagtagggcttcttgtcggcaagcga
atcgaggctttccgcaaccttacctcaacggttccgggtaaacagaggaaaggtggtcag
agttctcatcgtttccagcagctcaggttaattgctatccatgagttctataagaggata
ggagacgccgcagatgatattttcctcgctgttgaacctaaagatcttaaaggtatcctg
ataggaggcccttctcctacgaaggaagagttctacgccggggagtttctgcaccacgag
cttatgagaaagatccttgggctctttgatacggcttacactgatgaatcagggctttcg
gaacttgtgaatgctgccgcagataagcttcaggatcttgagctaatggggcagaagaac
gctgtcagggccttcttcaaagaacttatttccgactcgggtaaagtagcctatggggaa
acccaggtacgagcaaaccttgaaatcaatgcagtggatgtgcttctgctttccgaagat
ctgcgggcagaaagggtaaccacaaagtgcagtgtttgcggatatgaaaataagtggaca
cggcgctggaaacccggggaatctgcacctacagccgggaattgtccaaactgtggagct
tcccttgaagtcacggatgttaccgatattgttgacgagctctcagcccttgctgacaga
agcaatgcaaaggtcgtttttgtgtctacagactttgatgaaggctcgcaacttatgaat
gctttcggaggcattgctgcaattctcaggtacagtactggagtttga
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