Labilibaculum antarcticum: ALGA_0884
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Entry
ALGA_0884 CDS
T05376
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mbas
Labilibaculum antarcticum
Pathway
mbas00061
Fatty acid biosynthesis
mbas00071
Fatty acid degradation
mbas01100
Metabolic pathways
mbas01212
Fatty acid metabolism
mbas02024
Quorum sensing
mbas04146
Peroxisome
Module
mbas_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mbas00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
ALGA_0884
00071 Fatty acid degradation
ALGA_0884
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
ALGA_0884
09145 Cellular community - prokaryotes
02024 Quorum sensing
ALGA_0884
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mbas01004
]
ALGA_0884
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mbas04147
]
ALGA_0884
Enzymes [BR:
mbas01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
ALGA_0884
Lipid biosynthesis proteins [BR:
mbas01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
ALGA_0884
Exosome [BR:
mbas04147
]
Exosomal proteins
Exosomal proteins of breast milk
ALGA_0884
Exosomal proteins of breast cancer cells
ALGA_0884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BAX79271
UniProt:
A0A1Y1CJ16
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All DBs
Position
1209147..1210916
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AA seq
589 aa
AA seq
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MVTRIFDLLNNYRKNFPDKRDAFAKKGKDEWIPFSTEQYLTYSDYISYALLENGIKKNDC
IITITNNRPEWNFVDMGLAQIGAVHVPLYPTINAKSYDFIILHCKPVAIFVSDLVLYEKI
APLLKNHPSVKFVYSFEKIKSVAHWSRLLEIGKEAESKLKTTLLAIKDSIQPDDLATIIY
TSGTTGNPKGVMLSHNNFMSNVLASATSLNLDSSHKTLSFLPINHVYERMVNYQYQYKGI
SIYYAESMDTIGDNLRELKPHGFATVPRLLEKVYDKIMAKGKSLPFLKKAIFLWAVKLGQ
RYELNSANGGWYEFKLKIARKLVFRKWQEALGGNIKFMCSGGAPLQVRLERLFWAAGIPV
QEGYGLTETSPIISANQNSYPNVRFGTVGPVLKGVEVKIAEDGEILARGPNVMLGYYKNL
ELTKEVLDEDGWFHTGDIGCWEDERFLKITDRKKEMFKTSGGIYISPQEIENKLKESPFI
DQSIVCGESKRFPSVLISPNFEFLKEYCKRKKIPFTDTAQVIREEKIRDRIWKEIEKTNL
NLDRPKKIKSFRLVADVWTPESGELSPTLKLKRKVLKNKYQLLVDEIYS
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggtaacgcgcatttttgacttattaaacaattacagaaaaaattttccggacaaaaga
gatgcctttgcaaaaaaaggaaaagatgaatggataccattttcaacggaacaatacctt
acttattctgattatataagttatgctttgctggaaaatgggattaaaaagaatgattgt
attattacaataaccaataatagacctgaatggaattttgttgatatgggcttagcgcaa
attggcgctgtgcatgttcccttgtatccaacaataaatgctaaaagttacgatttcatt
atcctccactgcaagccagttgctatttttgtgtccgatcttgtattatacgaaaaaatt
gcacctctgctaaaaaatcatccatcggtaaagtttgtgtattcctttgagaaaataaaa
tcagttgcccactggagtcgcttacttgaaattggcaaagaagctgaaagcaaactgaaa
acaacgctgttggcgataaaagacagtattcaaccagatgatctagcaactattatttat
acttcgggaacaacagggaatcctaaaggtgttatgctttcgcacaacaattttatgagc
aatgttttggcgtctgctaccagcttaaatttagattcatctcacaaaacattgagtttc
ctcccaattaatcatgtttacgaacgaatggtaaattaccaatatcaatataaaggaatt
agtatttactacgccgaaagtatggataccattggagataatttacgggaactaaaacct
catggttttgcaacagttccccgcttgctcgagaaagtatatgataaaataatggcaaaa
gggaaaagtttaccctttttgaaaaaagcaattttcctttgggctgttaagcttggtcaa
agatatgaattgaacagtgctaatggcggatggtatgaattcaaattaaaaattgcccgc
aaactagttttcagaaaatggcaggaggcattaggtggcaacatcaagttcatgtgctcg
ggtggtgccccattgcaagttcgtctggagcgactattttgggctgcaggcattcctgtt
caagagggatatggattaactgagacatcaccaattatttcggcaaatcaaaattcttat
cccaacgtaagatttggtactgtgggaccagtcttaaaaggtgtagaggttaaaattgca
gaagatggtgaaattctggcccgaggaccaaacgtgatgcttggctactacaaaaatctg
gaattaacaaaggaagtacttgacgaagatggttggtttcacactggagatattggctgc
tgggaagatgaacgctttttaaaaattaccgatcgtaaaaaagaaatgtttaaaacatcc
ggaggaatatatatttcgccgcaggaaattgaaaacaagcttaaggaatcaccatttatt
gatcaaagtattgtttgtggggaatcaaaacgtttcccttcagtactgatatctccaaat
tttgaatttttaaaagaatactgcaagcgaaagaaaattccatttaccgatacggcacag
gtcataagagaagaaaaaatacgggatcgtatctggaaagaaattgagaaaacgaatctc
aatttagatcgacctaaaaaaattaaaagctttcgcttggttgccgatgtatggactcct
gaaagtggtgaactctctcctaccctaaaattaaaaagaaaagttttaaaaaataaatat
caactgcttgttgatgaaatttattcctaa
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