Labilibaculum antarcticum: ALGA_1117
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Entry
ALGA_1117 CDS
T05376
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
mbas
Labilibaculum antarcticum
Pathway
mbas03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mbas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ALGA_1117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbas03400
]
ALGA_1117
Enzymes [BR:
mbas01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
ALGA_1117
DNA repair and recombination proteins [BR:
mbas03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ALGA_1117
Prokaryotic type
ALGA_1117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
TPR_6
Motif
Other DBs
NCBI-ProteinID:
BAX79503
UniProt:
A0A1Y1CHD6
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All DBs
Position
1511581..1512639
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AA seq
352 aa
AA seq
DB search
MLSNQIINWYLQNKRELPWRETKDPYQIWISEIMLQQTRVATAIDYFNRFIEQFPTISDL
AKAKEQEVLKLWQGLGYYSRARNLHATAKIIQSQYNGIFPDSYEEILKLKGIGSYTAAAI
ASFAFNLPHAAVDGNVYRVLSRIYGIDKAIDSTEGKKYFQSIASETMGNARPEIFNQAII
EFGALQCIPRNPKCDICPLFANCFAYNNAQVDQLPIKSKQIKTKNRYFYYLFLSCKSQFL
IEKREKKDIWENLFQYPLIEYNKPIPTDELLQTLEWKELFGNKNMLIHSVSGNVLHKLSH
QNLHTTFIHIEMDIKKLKKNTDYKIINYSEIPNYPFPKLIEDHLNMIVKNNT
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcttagtaaccaaatcataaactggtatttgcagaataaacgcgaattaccatggcga
gaaacaaaagatccttatcaaatatggatatcagaaatcatgcttcagcagactagagtt
gctactgcaattgattattttaatcgctttatagaacaattcccaacaatttcggattta
gctaaagcaaaagaacaagaagttctaaaactttggcaaggattaggctactattcccgt
gcaagaaacttacatgcgacagcaaaaattattcaatcgcaatataacggtatttttccg
gactcctatgaagaaattcttaaattaaaaggaattgggtcgtacaccgcagcggcaatt
gcctcatttgccttcaacttgccacatgctgctgttgacgggaatgtttaccgcgtatta
tcacgaatatatggtatcgataaagcaattgacagcactgaggggaaaaaatattttcag
agtattgcaagtgaaacgatggggaatgcccgtccagaaatcttcaaccaagcaattatt
gaatttggcgctctacaatgtattcctcgtaatccgaaatgtgatatttgtccgcttttt
gcaaattgctttgcatataataatgcccaagttgatcaattaccaattaaatcgaaacaa
attaaaactaaaaaccgatatttttactatttgtttctatcttgtaaaagtcaattttta
atcgaaaaaagagagaaaaaagacatttgggagaacttgttccaataccctctaattgaa
tacaataaaccaattccaacggatgaattgttacaaactttggaatggaaagaattattt
gggaataagaacatgcttattcactcggtatctggaaatgtgttgcataaattaagtcat
caaaatttacacaccactttcattcacattgaaatggatattaaaaaattgaaaaaaaac
actgactataaaatcataaactattcagagatcccgaattacccattccctaaactgatt
gaagatcaccttaatatgattgtgaaaaataacacataa
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