Labilibaculum antarcticum: ALGA_1640
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Entry
ALGA_1640 CDS
T05376
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mbas
Labilibaculum antarcticum
Brite
KEGG Orthology (KO) [BR:
mbas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mbas03016
]
ALGA_1640
Enzymes [BR:
mbas01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ALGA_1640
Transfer RNA biogenesis [BR:
mbas03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ALGA_1640
Prokaryotic type
ALGA_1640
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BAX80015
UniProt:
A0A1Y1CI62
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All DBs
Position
2133861..2134565
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AA seq
234 aa
AA seq
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MIQFETDNDFKEGALLLLNKPYEWTSFDLVNKIKHKIKHQFHYEKVKVGHAGTLDPLATG
LLIVCVGKYTKKIDSYQSQVKEYIAAIQLGATTPSFDLETEIDETHPTEHITKELIDETL
KGFIGEIQQRPPNYSAVKIKGKRAYEYARKGQEVEIKMKTLVIDEIEVLEFEKNILKLRI
VCSKGTYIRALARDIGRKLNSGAHLTALRRTRIGDFHINDALEIEDFIKFLENL
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgattcaattcgaaaccgataatgattttaaggaaggagctttacttctgttgaataaa
ccatacgaatggacttcgtttgatttagtaaacaagataaagcataaaatcaagcatcaa
tttcattacgagaaagtaaaggtaggacatgccggaacacttgatcctttagccacaggc
ttactaattgtttgcgttgggaaatacacaaaaaaaatagacagctaccaatcgcaggtt
aaggaatacattgctgcaatacagctaggagcaaccactccttcttttgatttggagact
gaaattgatgaaacacaccctaccgaacacatcactaaagaattaattgatgaaacatta
aaaggttttatcggtgaaatacaacaacgaccgcccaactattcggcagtaaagataaag
ggcaaaagagcttacgaatatgctcgaaaaggacaggaagttgaaattaaaatgaaaact
cttgttatagacgaaatagaagttctggaatttgaaaagaacatcttaaagctaagaatt
gtttgcagcaagggaacatacatacgagcacttgcccgagatattggtagaaaactcaat
agtggtgctcatttaacggccctgcgaagaactagaatcggcgattttcatatcaacgat
gcccttgaaattgaagattttataaaattcttagaaaatttataa
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