Labilibaculum antarcticum: ALGA_1953
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Entry
ALGA_1953 CDS
T05376
Name
(GenBank) DNA polymerase III subunit delta
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
mbas
Labilibaculum antarcticum
Pathway
mbas03030
DNA replication
mbas03430
Mismatch repair
mbas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ALGA_1953
03430 Mismatch repair
ALGA_1953
03440 Homologous recombination
ALGA_1953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbas03032
]
ALGA_1953
03400 DNA repair and recombination proteins [BR:
mbas03400
]
ALGA_1953
Enzymes [BR:
mbas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ALGA_1953
DNA replication proteins [BR:
mbas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ALGA_1953
DNA repair and recombination proteins [BR:
mbas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ALGA_1953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
IstB_IS21
FeoB_associated
Motif
Other DBs
NCBI-ProteinID:
BAX80312
UniProt:
A0A1Y1CK02
LinkDB
All DBs
Position
2520853..2521977
Genome browser
AA seq
374 aa
AA seq
DB search
MQFKDIIGLESVKSQFIQTVTENRISHAQLLVGPAGVGKLPLAIAFAQYVSCLDRKENDS
CGVCSSCKKYQKLIHPDLHFVFPVVTGKGFTNPVSDNFIASWRSQIESDQYFDLGEWYKT
LGVDNAQGLIYSSESNEIIRKLNLKTYESDYKIMVVWLPEKMHRSCANKLLKMIEEPPNK
TLFLMVSEEPEKIIQTILSRTQIVNVSKIDDADLSKALTSEFDLSGTELTNVVRLAGGSY
RKARILIKNSDENAFNFENFVTIMRLSYARKVMEIMEWSELVAGIGRERQKSFLNYCVRM
VRENFILNLKQPEMVFLNGEEMNFSQRFSPFINEENVWILADELSKAHSDIERNANSKIV
FLDLSLKLVKLLRP
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttaaagatataattggacttgaatctgttaagagtcagttcatacaaacagtt
accgaaaatagaattagtcacgctcaattactggttggaccggctggagttgggaaactt
cctttggcgattgcatttgcacaatatgtgtcctgtttggatcgaaaagagaatgattca
tgtggagtttgttcgtcttgcaaaaaatatcagaaattaattcatcccgatttacatttt
gtttttccagtcgtaacggggaaaggttttacaaatccggtgagtgataattttattgcc
agttggagatctcaaattgaaagtgatcaatattttgatttgggtgaatggtacaaaact
ctgggggtggataatgctcaaggcttaatttattcctcggagagtaatgagattatacgc
aagttaaacttgaagacttacgagtctgattacaagataatggtggtttggttgccagag
aaaatgcatcgctcttgtgccaataaacttctgaaaatgattgaggaaccgcctaataaa
actctgtttttaatggtttcggaggagccggaaaaaattattcagacaattctttccaga
acgcaaattgtaaatgtttctaaaattgacgatgctgatttgtcaaaggcacttacctca
gaatttgatttgtcgggaacagaattgactaatgtggtgcgtttggccgggggaagctat
cgtaaagccagaatattaattaagaactcagatgagaatgctttcaattttgagaacttt
gttaccattatgagattaagctatgcacgtaaggtgatggaaataatggaatggtcggag
ttggttgcaggaattggtcgtgagcgtcaaaagagttttttgaactactgtgttcgtatg
gtaagagaaaattttattttaaatttaaaacaacctgaaatggtctttttgaatggtgaa
gaaatgaatttttcccaacgattttccccttttattaatgaggaaaatgtttggattctt
gctgatgagctctcaaaagcgcattcagatattgaaagaaatgccaattcgaaaattgtt
tttctcgatttgagtttgaagctagttaaattattaagaccataa
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