Labilibaculum antarcticum: ALGA_2197
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Entry
ALGA_2197 CDS
T05376
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mbas
Labilibaculum antarcticum
Pathway
mbas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ALGA_2197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbas03019
]
ALGA_2197
03110 Chaperones and folding catalysts [BR:
mbas03110
]
ALGA_2197
03029 Mitochondrial biogenesis [BR:
mbas03029
]
ALGA_2197
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mbas04147
]
ALGA_2197
Enzymes [BR:
mbas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ALGA_2197
Messenger RNA biogenesis [BR:
mbas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ALGA_2197
Chaperones and folding catalysts [BR:
mbas03110
]
Heat shock proteins
HSP60 / Chaperonin
ALGA_2197
Mitochondrial biogenesis [BR:
mbas03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ALGA_2197
Exosome [BR:
mbas04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ALGA_2197
Exosomal proteins of other body fluids (saliva and urine)
ALGA_2197
Exosomal proteins of breast cancer cells
ALGA_2197
Exosomal proteins of colorectal cancer cells
ALGA_2197
Exosomal proteins of bladder cancer cells
ALGA_2197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BAX80530
UniProt:
A0A1Y1CJR2
LinkDB
All DBs
Position
2832954..2834591
Genome browser
AA seq
545 aa
AA seq
DB search
MAKEIKFNIEARDLLKKGVDELANAVKVTLGPSGRNVVIDRKFGAPQITKDGVTVAKEIE
LADSGANMGAQMVKEVASKTGDDAGDGTTTATVLAQSIVNVGLKNVTAGANPMDLKRGID
IAVAAVVANIREQAQAVGDNFDKIKQVAKIAANNDETIGALIAQAMEKVKKEGVITVEEA
KGTETYVKVVEGMQFDRGYISPYFITDPEKMEADLENPYILLYDKKISTMKDLMPVLEPV
AQTGRPLMIIAEDIDGEALATLVVNRLRGSLKVAAVKAPGFGDRRKEMLEDIAILTGGVV
ISEEKGMKLDQVTIEMLGQSEKITIDKETTTIVNGNGEKEGILGRVSQIKTLIENSTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALSATRAAVEEGIVPGGGVAYI
RAISALENLKGDNEDETTGIEIIKRAIEEPLRQIVLNAGGEGAVVVDKVRAGKGDFGYNA
RVGEYQNLFETGVIDPAKVARVALENAASIAGMFLTTECVLIDIKEEAPAMPMGGGMGGG
MPGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagaaataaaatttaatatagaagctcgtgaccttttaaaaaaaggtgttgat
gagttggcaaatgcagtaaaagtaactttaggacctagtggtagaaatgttgttattgat
cgcaagtttggtgctcctcagattactaaagatggtgttactgttgcaaaggaaatcgaa
ttggctgattccggagcaaatatgggagctcagatggttaaggaagtggcttcgaaaact
ggtgatgatgctggtgacggaactaccactgctactgttttagcacaatctatcgtaaat
gttggattgaaaaatgtaactgcaggtgctaatccaatggatttaaaacgcggtattgat
attgctgttgccgctgttgttgctaacattagagagcaagctcaggctgttggggataac
ttcgataagattaagcaagttgctaaaatcgctgcaaataatgatgagactattggtgca
ctgattgctcaggcgatggaaaaagtgaaaaaagaaggtgttattacggtcgaagaagca
aaaggaacagaaacttacgtgaaagtggttgaagggatgcagtttgacagaggatacatc
tctccgtatttcattactgatcctgaaaaaatggaagctgatcttgagaatccatatatc
ttattgtacgataagaaaatttctacaatgaaagatttgatgccggttcttgaaccagtt
gctcagacaggtcgtccgctgatgattattgctgaagacatagatggcgaagcattagct
actttggttgtgaatcgtttaagaggttcattaaaagttgcggctgttaaagctccgggc
tttggtgacagaagaaaagaaatgttggaagatattgcgattcttactggcggggttgtt
atttctgaagaaaagggaatgaaattggatcaagtaactatagagatgcttggtcaatca
gaaaaaattaccattgataaagaaactacaactattgtaaatggtaatggagaaaaagag
ggtatccttggccgtgtttctcaaatcaaaactttaatcgagaattcaacttctgattac
gacaaagaaaaacttcaggaaagattagccaaattggctggtggtgtagctgtactttat
gttggtgctgcttctgaagttgagatgaaagagaaaaaagatcgtgtagacgatgcattg
agtgctactcgtgcggctgttgaagaaggaattgttcctggaggtggtgtagcgtacatt
cgagcaatttctgctttggaaaaccttaaaggtgataacgaagacgaaacaacaggtatc
gaaattataaagcgtgccattgaagagccattgcgtcagattgttcttaatgctggtggc
gaaggtgctgtagtggttgataaggtgagagccggcaaaggcgatttcggttacaatgct
cgtgttggagaatatcagaatttattcgaaacaggtgtaattgatcctgctaaagttgct
cgtgtagctcttgaaaatgcagcttcaattgctggaatgttcttaactaccgaatgtgtt
ttaattgatattaaggaagaagctcctgctatgccaatgggtggcggaatgggcggagga
atgcctggaatgatgtaa
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