KEGG   Labilibaculum antarcticum: ALGA_2197
Entry
ALGA_2197         CDS       T05376                                 
Name
(GenBank) molecular chaperone GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
mbas  Labilibaculum antarcticum
Pathway
mbas03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mbas00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ALGA_2197
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mbas03019]
    ALGA_2197
   03110 Chaperones and folding catalysts [BR:mbas03110]
    ALGA_2197
   03029 Mitochondrial biogenesis [BR:mbas03029]
    ALGA_2197
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mbas04147]
    ALGA_2197
Enzymes [BR:mbas01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     ALGA_2197
Messenger RNA biogenesis [BR:mbas03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     ALGA_2197
Chaperones and folding catalysts [BR:mbas03110]
 Heat shock proteins
  HSP60 / Chaperonin
   ALGA_2197
Mitochondrial biogenesis [BR:mbas03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    ALGA_2197
Exosome [BR:mbas04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   ALGA_2197
  Exosomal proteins of other body fluids (saliva and urine)
   ALGA_2197
  Exosomal proteins of breast cancer cells
   ALGA_2197
  Exosomal proteins of colorectal cancer cells
   ALGA_2197
  Exosomal proteins of bladder cancer cells
   ALGA_2197
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: BAX80530
UniProt: A0A1Y1CJR2
LinkDB
Position
2832954..2834591
AA seq 545 aa
MAKEIKFNIEARDLLKKGVDELANAVKVTLGPSGRNVVIDRKFGAPQITKDGVTVAKEIE
LADSGANMGAQMVKEVASKTGDDAGDGTTTATVLAQSIVNVGLKNVTAGANPMDLKRGID
IAVAAVVANIREQAQAVGDNFDKIKQVAKIAANNDETIGALIAQAMEKVKKEGVITVEEA
KGTETYVKVVEGMQFDRGYISPYFITDPEKMEADLENPYILLYDKKISTMKDLMPVLEPV
AQTGRPLMIIAEDIDGEALATLVVNRLRGSLKVAAVKAPGFGDRRKEMLEDIAILTGGVV
ISEEKGMKLDQVTIEMLGQSEKITIDKETTTIVNGNGEKEGILGRVSQIKTLIENSTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALSATRAAVEEGIVPGGGVAYI
RAISALENLKGDNEDETTGIEIIKRAIEEPLRQIVLNAGGEGAVVVDKVRAGKGDFGYNA
RVGEYQNLFETGVIDPAKVARVALENAASIAGMFLTTECVLIDIKEEAPAMPMGGGMGGG
MPGMM
NT seq 1638 nt   +upstreamnt  +downstreamnt
atggctaaagaaataaaatttaatatagaagctcgtgaccttttaaaaaaaggtgttgat
gagttggcaaatgcagtaaaagtaactttaggacctagtggtagaaatgttgttattgat
cgcaagtttggtgctcctcagattactaaagatggtgttactgttgcaaaggaaatcgaa
ttggctgattccggagcaaatatgggagctcagatggttaaggaagtggcttcgaaaact
ggtgatgatgctggtgacggaactaccactgctactgttttagcacaatctatcgtaaat
gttggattgaaaaatgtaactgcaggtgctaatccaatggatttaaaacgcggtattgat
attgctgttgccgctgttgttgctaacattagagagcaagctcaggctgttggggataac
ttcgataagattaagcaagttgctaaaatcgctgcaaataatgatgagactattggtgca
ctgattgctcaggcgatggaaaaagtgaaaaaagaaggtgttattacggtcgaagaagca
aaaggaacagaaacttacgtgaaagtggttgaagggatgcagtttgacagaggatacatc
tctccgtatttcattactgatcctgaaaaaatggaagctgatcttgagaatccatatatc
ttattgtacgataagaaaatttctacaatgaaagatttgatgccggttcttgaaccagtt
gctcagacaggtcgtccgctgatgattattgctgaagacatagatggcgaagcattagct
actttggttgtgaatcgtttaagaggttcattaaaagttgcggctgttaaagctccgggc
tttggtgacagaagaaaagaaatgttggaagatattgcgattcttactggcggggttgtt
atttctgaagaaaagggaatgaaattggatcaagtaactatagagatgcttggtcaatca
gaaaaaattaccattgataaagaaactacaactattgtaaatggtaatggagaaaaagag
ggtatccttggccgtgtttctcaaatcaaaactttaatcgagaattcaacttctgattac
gacaaagaaaaacttcaggaaagattagccaaattggctggtggtgtagctgtactttat
gttggtgctgcttctgaagttgagatgaaagagaaaaaagatcgtgtagacgatgcattg
agtgctactcgtgcggctgttgaagaaggaattgttcctggaggtggtgtagcgtacatt
cgagcaatttctgctttggaaaaccttaaaggtgataacgaagacgaaacaacaggtatc
gaaattataaagcgtgccattgaagagccattgcgtcagattgttcttaatgctggtggc
gaaggtgctgtagtggttgataaggtgagagccggcaaaggcgatttcggttacaatgct
cgtgttggagaatatcagaatttattcgaaacaggtgtaattgatcctgctaaagttgct
cgtgtagctcttgaaaatgcagcttcaattgctggaatgttcttaactaccgaatgtgtt
ttaattgatattaaggaagaagctcctgctatgccaatgggtggcggaatgggcggagga
atgcctggaatgatgtaa

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