Labilibaculum antarcticum: ALGA_2274
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Entry
ALGA_2274 CDS
T05376
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
mbas
Labilibaculum antarcticum
Brite
KEGG Orthology (KO) [BR:
mbas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mbas03016
]
ALGA_2274
Enzymes [BR:
mbas01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
ALGA_2274
Transfer RNA biogenesis [BR:
mbas03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
ALGA_2274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
BAX80606
UniProt:
A0A1Y1CJN8
LinkDB
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Position
complement(2939110..2940441)
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AA seq
443 aa
AA seq
DB search
MSNNSKKLFLETYGCQMNVADSEVVASIMEHDGFTIIKTREEADVILVNTCSIRENAETR
IRGRVQGFSELKKKNPKLLIGVIGCMAERLGEKLFDQEKNVNIIVGPDAYMDLPLLVKKA
ENGEKAINVELSLTETYKDICPSRIDETSISGFVSITRGCNNFCTYCIVPYTRGRERSRN
PESILQEVNDLSEKGYKEVTLLGQNVNSFVFKNSISEVSFPELLEMVAISVPNMRIRFAT
SHPKDMSDDTLRVIAKNDNICNFIHLPVQSGSDSVLKDMRRKYTQEWYKNRIEAIHKIIP
GCGISSDIFCGFHNESEEDFNQTIELMKWAKFDLAYMFKYSERPGTFAYKNLADNVPEDV
KQRRLEEMIVLQNQISLENNQGDIGKVFEVLIEGISKRSEQDVYGRTSQNKVIVFPKKEY
KIGDLANVIVKTCTKATLVGEAV
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagcaataacagcaagaaattatttttggagacttatggttgtcaaatgaatgtggcc
gacagtgaagttgtggcttcgataatggagcatgatggttttacaattatcaaaacccgc
gaagaagctgatgtaattctagtaaatacctgctcgattcgtgaaaatgctgagaccaga
attcgaggaagagtgcagggatttagcgaattaaagaaaaaaaacccaaaactattaatt
ggtgtaattggttgcatggctgaacgactcggcgaaaaattatttgatcaggaaaaaaat
gttaacattattgttggtcctgatgcttatatggatctaccacttcttgtaaaaaaagcc
gagaacggagaaaaagcgatcaacgtagagctttcccttactgaaacttacaaagatatt
tgcccgtcgagaattgatgaaacctcgatatcaggctttgtttctatcacaagaggttgc
aacaatttctgcacctattgtattgttccctataccagaggacgtgaacgcagccgaaat
ccggaaagtatacttcaagaagttaacgatttatcggaaaaaggatacaaagaagttacc
cttttgggacagaatgtaaattcctttgtctttaaaaactctatttcagaagtcagcttc
ccagagttattagaaatggttgcaatttcggtaccgaacatgagaattcgattcgcaacc
tcgcatcctaaagacatgagtgatgacacgctaagagttatcgccaaaaatgataatatc
tgcaatttcattcacctgccggtacaatcgggaagtgattccgttttaaaagacatgcgc
cgaaaatacacacaggaatggtataaaaacaggattgaggcaattcataaaattattccc
ggatgtggcatttcatctgatattttctgtggatttcataacgaaagcgaagaagatttc
aaccaaaccattgaattaatgaaatgggcgaaattcgatttggcctatatgttcaaatat
tcagaacgcccgggaacatttgcctacaagaatttagcagacaatgttcctgaagatgta
aagcaaagaagattggaagagatgattgtgctgcaaaatcagatatcattagaaaacaat
caaggtgacattggaaaagttttcgaagttttaatcgaaggaatttcaaagagatcggaa
caggatgtgtacggaagaacttcacaaaacaaagtgatcgtattccccaaaaaagagtac
aaaataggtgatctcgcaaatgtgattgtgaaaacttgcaccaaggcaacccttgtggga
gaagctgtataa
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