Labilibaculum antarcticum: ALGA_2444
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Entry
ALGA_2444 CDS
T05376
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
mbas
Labilibaculum antarcticum
Brite
KEGG Orthology (KO) [BR:
mbas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mbas03009
]
ALGA_2444
Enzymes [BR:
mbas01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
ALGA_2444
Ribosome biogenesis [BR:
mbas03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ALGA_2444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
Methyltransf_15
MTS
TRM5-TYW2_MTfase
N6_N4_Mtase
Cons_hypoth95
Methyltransf_11
PCMT
PrmA
RrnaAD
Motif
Other DBs
NCBI-ProteinID:
BAX80766
UniProt:
A0A1Y1CK47
LinkDB
All DBs
Position
complement(3163360..3164769)
Genome browser
AA seq
469 aa
AA seq
DB search
MGRNRKQKPLLEKVVIEKLAAEGKAIGRVDDKIVFVTGVIPGDIVDVQVNKKRKSFMEGY
PVAFHKHSPMKIDAFCEHFGVCGGCKWQNLPYEEQIKFKQQEVIDNLERIGKVELNGINE
IIASEKTKFYRNKLEFTFSNKRYLTSEEIAIGDDIKRTPALGFHVPKLFDKIVDINKCHL
QPEPSNAVRLAIKEYAFANDLSFFDIRNHEGFLRTLIIRTSTTDDVMIIVVFYHEDVEKR
EGLLKHLADKFPEVTSLMYIINEKANDSITDQEAILYKGVDHIFEQMENLRFKIGPKSFY
QTNSDQAYNLYCKTREFAELTGDEVVYDLYTGTGTIANFVAKQAKKVIGIEYVPEAIADA
KVNSEINGITNTEFFAGDMKNVLTKEFIELHGQPDTIIVDPPRAGMHTDVVETILHAAPK
RIVYVSCNSATQARDLALMDEAYKVTKVQAVDMFPHTHHVENIVQLERR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
gtgggaagaaatagaaagcaaaaaccacttctggaaaaagtagtaatagagaagttagct
gccgagggcaaagcgattggtagagttgatgacaaaatcgtatttgttaccggtgtaata
ccaggcgatattgttgatgttcaagtcaacaaaaagcgcaaaagttttatggaaggctat
cctgttgcttttcacaaacattctccgatgaaaattgatgcattttgtgagcattttggg
gtttgtggtggctgtaaatggcagaatttaccctacgaagaacaaataaaatttaaacaa
caagaagtcattgacaatttagaacgaattggcaaagtagaactaaatggaatcaatgaa
ataattgcttcagaaaaaactaaattctatcgcaataagctggaatttaccttttctaac
aagcggtaccttaccagcgaggaaattgctattggcgatgatataaaaagaactcctgca
cttggctttcacgttccaaaattattcgataaaattgttgatattaataaatgtcactta
caaccggaaccatcgaatgcagttcgtttagccattaaagaatatgcttttgctaatgat
ttatccttttttgatatcagaaatcatgaaggttttctaagaacattaataatcagaacc
tcaacaaccgacgatgtcatgattattgttgttttctatcatgaagatgttgagaagaga
gaaggattgctaaagcatcttgctgataaatttccggaagtcacttcattaatgtacatc
attaatgaaaaagccaacgattcaattaccgatcaggaagctatcttgtataaaggtgtc
gatcatatttttgagcaaatggaaaatttacgctttaaaattggcccaaaatcgttctat
caaaccaattctgatcaagcttacaacctgtattgcaaaacacgtgagtttgccgaatta
acaggcgacgaagtagtttacgatctatataccggaaccggaaccattgctaattttgta
gccaagcaggctaaaaaagtaattggaattgaatacgtgcccgaagccattgccgatgcg
aaggttaattctgaaattaacggaattaccaatactgaatttttcgctggtgacatgaaa
aatgttcttaccaaagaatttattgagcttcatggccaaccagacaccattatcgttgat
ccaccgcgggcaggaatgcacaccgatgtagttgaaacaattctacacgctgcaccaaaa
cgcattgtctacgtgagctgtaattcagcaactcaggcacgcgatctggctctaatggac
gaagcctacaaagtaaccaaagtacaagctgttgatatgtttccgcacacacatcatgtg
gagaatatagtgcagttggaaagacgataa
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