Labilibaculum antarcticum: ALGA_3126
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Entry
ALGA_3126 CDS
T05376
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
mbas
Labilibaculum antarcticum
Pathway
mbas00541
Biosynthesis of various nucleotide sugars
mbas01100
Metabolic pathways
mbas01250
Biosynthesis of nucleotide sugars
Module
mbas_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
mbas00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
ALGA_3126
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
mbas01005
]
ALGA_3126
Enzymes [BR:
mbas01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
ALGA_3126
Lipopolysaccharide biosynthesis proteins [BR:
mbas01005
]
Lipid A
ALGA_3126
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
PHP
Motif
Other DBs
NCBI-ProteinID:
BAX81426
UniProt:
A0A1Y1CLZ2
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All DBs
Position
complement(4051793..4052611)
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AA seq
272 aa
AA seq
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MIKNIPNIKYTDSGNFFLMAGPCAIESEEIAMRIAERIVQITDKLEIPFIFKGSYRKANR
SRLDSFAGIGDEQALKILKKVSDTFGVPTVTDIHSAEEAAMAAAYVDVLQIPAFLCRQTD
LLIAAAETGKVINIKKGQFLSAESMKFAVNKVRESGNDQVILTDRGTMFGYQDMIIDYRG
IPAMQENNCPVVLDITHSLQQPNQTSGVTGGRPELIETVAKAGIAVGVDGIFIETHPDPA
NAKSDGANMLHLDYLEDLLTKLVAIRKVINQF
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaaacattccaaatataaaatacacagatagtggtaacttctttcttatggcc
ggcccttgtgctattgaaagtgaagaaattgctatgaggattgctgagcgaattgttcaa
attacggataaacttgaaatcccattcatttttaagggatcgtatcgaaaagcaaaccga
tcaagattagattcatttgctggtattggtgacgagcaagctttgaaaatcttgaaaaaa
gtaagcgatacttttggagttccaacggttacagatattcactcggcagaagaagcggca
atggctgcggcttatgttgatgtattgcaaattcctgcctttttatgtcgccaaaccgat
cttttaattgccgctgcagaaacaggaaaagtgataaatatcaaaaaaggtcagttcctt
tctgccgaatcaatgaaatttgctgtaaataaagtgcgggaatcaggaaatgatcaagta
attctaactgaccgtggaacgatgttcggctatcaggatatgattatagattacagaggt
attcctgctatgcaagagaataattgtcctgttgttttggacattacccattcgttacag
caaccaaaccaaacaagtggagttaccggtggtcgtcctgagctaatagagacggttgca
aaagcaggtattgctgttggtgtggatggaatctttatcgaaactcatcccgacccggcc
aatgccaaatcggatggagccaacatgcttcatttagattatttggaagatttacttaca
aaactggttgccattcgaaaagtgatcaatcaattttaa
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