Labilibaculum antarcticum: ALGA_3155
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Entry
ALGA_3155 CDS
T05376
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mbas
Labilibaculum antarcticum
Pathway
mbas03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mbas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ALGA_3155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbas03400
]
ALGA_3155
Enzymes [BR:
mbas01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ALGA_3155
DNA repair and recombination proteins [BR:
mbas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ALGA_3155
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAX81455
UniProt:
A0A1Y1CM77
LinkDB
All DBs
Position
complement(4084184..4084777)
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AA seq
197 aa
AA seq
DB search
MNQLNLQEKRELLDALNYEIRTCEKCSLSATRKYALTGEGNIGASILFVALSPGAKEDIG
NKMFIGPSGQVFNRLLQTAGIERQSVYMTNLVKCLLPNNRKPTWNEIEACSSFLGNEISI
IQPQIIVPLGYYATRSILTKYHADPSREEMSFKNVNGKLLVLDGMKIFPLTHPSALLYNP
SFEPSTIEKYSKLNSYL
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagctaaacctgcaagaaaaacgagaattactggatgctcttaattatgagatt
aggacttgtgagaaatgtagtttatcggctacaagaaaatatgcgcttaccggtgaagga
aatataggtgccagtatcctatttgttgcgctatctcctggagcgaaagaagatatcgga
aataaaatgtttattggcccttcgggacaggtttttaatagactgctgcaaacagccgga
attgaaagacaatcggtatatatgactaatttggtgaaatgtttattgccgaataatcgg
aaacctacatggaatgaaattgaagcatgcagctcctttttgggtaacgaaatttcgatt
atccaacctcaaatcatagtccctttgggttattatgcaactcgctcaattttaacgaaa
tatcacgctgatccttcccgtgaagaaatgagttttaaaaatgtaaacggcaaattattg
gttctcgatggaatgaaaatatttccattgacacatccatctgcccttctatataatccc
tcttttgaaccgagtaccatagagaaatatagtaagctaaattcctatttgtaa
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