Labilibaculum antarcticum: ALGA_3293
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Entry
ALGA_3293 CDS
T05376
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
mbas
Labilibaculum antarcticum
Brite
KEGG Orthology (KO) [BR:
mbas00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mbas02000
]
ALGA_3293
Transporters [BR:
mbas02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
ALGA_3293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
SusD-like
DUF6996
Motif
Other DBs
NCBI-ProteinID:
BAX81593
UniProt:
A0A1Y1CNL1
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All DBs
Position
4240883..4242358
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AA seq
491 aa
AA seq
DB search
MKYTKFLFFAITGILFGSCDTEEFLNPLPDSAIVAESYFQSDDDVLSGIIGMYDALQGVN
ENTESSSARYNRGVQLEYLLTEHRSDNTRSKTLEGSRADFQRYIVEADNVQSEDYYQSMF
EIIFRANNVLKYVDKADATNINKYAAEAKFLRGYAYFNLVRLYGPVPLVTTVVGADEKEL
LFTRIEESIVYEQIVSDLQEGVTYLDNTHKSRASKAAAQGILAKVYLTQPTRNYSGAKQL
CEDIMNSGFALESNFKDVFYNELNDEIIFAVQYLSGNPAESQGFSSEFTSYKRQGKQDGL
NIVNPNLAVDFIANGGNRTAVSYAAFGDDADLPIPEIAEVIKFLPDGYDISDTNLPTYGG
APSLAGNDWIILRYSDVLLMHAEAIMEGGDYTADNDAINSFMEVRVRAGFDAIADRPSVL
TKDDLLLERRVELAFENHRFFDLVRFGVAHEVLGAHAEAMGYSSYNIRKLLLPIPSREIN
LSDGILTQNPQ
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatacaaaatttttattttttgctattacaggaatcttatttggttcttgtgat
acagaggagtttttgaatccattaccagactctgctattgttgctgaaagctattttcaa
tcagacgatgatgttttatctggaattattgggatgtatgatgccctacaaggggttaat
gaaaatactgaatcaagttcagcaagatacaatagaggagtacaattagagtatcttttg
actgaacaccgatctgataatacaagaagtaaaacacttgaaggttcaagagctgatttt
caaagatatatcgtggaggctgataatgttcagtctgaagattattaccaatctatgttt
gaaattatttttagagcaaataatgtcttgaaatatgttgataaggctgatgctacaaac
attaataaatatgctgccgaggctaagtttttaagagggtatgcatattttaacttagta
agattgtacgggccagtaccattggtaactactgtagttggcgctgacgaaaaagaattg
ctatttactagaatagaggaatcaatagtttatgagcaaattgtatcagatttacaagaa
ggggttacttatttagataacacacataagtctagagcttctaaagctgcggcgcaagga
attttagctaaagtgtacttaacacaaccaacacgtaactattcaggtgcaaaacaattg
tgtgaggacattatgaacagtggttttgctttagaatctaattttaaggatgtattctac
aacgagttaaacgacgaaattatttttgctgttcagtacttatctggaaacccagcagaa
agtcaaggtttttcatctgaatttacttcttacaaacgtcaaggtaaacaggatggactt
aatatagttaatccaaatcttgctgtagattttattgctaatggaggaaatagaacggct
gtgtcttatgctgcttttggtgatgatgctgatcttcctataccggagatagccgaagtc
ataaagtttttaccagatgggtatgacatttctgatacaaaccttcctacttatggagga
gctccttcactagcgggtaacgactggattattttacgttattctgatgtgttattaatg
catgcagaggctattatggaaggtggagattatactgcagataatgatgctataaattct
tttatggaagttagagttagagcagggtttgatgctatagcagatcgcccttcagtttta
actaaagatgatttattgcttgaaagaagagtagaattagcttttgaaaatcatcgtttc
tttgatttagtaaggtttggtgttgcacatgaagtattgggtgcacatgccgaagcaatg
ggctatagtagttataatattagaaaattattattaccaattccttcaagggaaattaat
ttaagtgatggtattttaactcaaaatcctcaataa
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