Labilibaculum antarcticum: ALGA_3599
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Entry
ALGA_3599 CDS
T05376
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mbas
Labilibaculum antarcticum
Pathway
mbas03420
Nucleotide excision repair
mbas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mbas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ALGA_3599
03430 Mismatch repair
ALGA_3599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbas03400
]
ALGA_3599
Enzymes [BR:
mbas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ALGA_3599
DNA repair and recombination proteins [BR:
mbas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ALGA_3599
MMR (mismatch excision repair)
Other MMR factors
ALGA_3599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_22
Viral_helicase1
AAA_30
AAA_12
DEAD
Tail_spike_N
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
BAX81891
UniProt:
A0A1Y1CRM2
LinkDB
All DBs
Position
complement(4613082..4615370)
Genome browser
AA seq
762 aa
AA seq
DB search
MSLKNLHRKLGINHQSGDEFDPIAAFEAEDLPENLNLIPPERFTEPKDNYKQELKLVAEK
NASLSAALEHLNPYQLQAIFSDEQKVVLSAMVGSGKTTVLTYKLLYLHFIKGIPLSQMAV
LTFTNKAAREIRERILSFYGDKMIPSSQELRYFGTFHSMARQLLKEHPKLQDLGFTPSFS
IMDQEAKEDFLHRLILSHELNVKYQNKLDKRLKLYRHEKQILYGNMKYPDDLPQLLQLSR
EEKQANNLMDFDDLISIVNWLLHRDKSFLPQWIIVDEFQDCNEDQLEFINHLSNKDTSFL
AVGDPNQSIYAWRGSTSKILQNYVADSSCCMMRLPLNYRTSSQLLDAAACLLQKDDNNLQ
ATRPEGKKLIIRNHFDDHQEAHYLVQKCRELNQTGTPWEEIALLFRTRQQIGLFETIFTK
EGIPCEMLSKTSLREQPALFWLQRIMLAAFHPNDFDSILQVFTSTEFGCLKMGKSLITAY
QKFTWEKKFDTKLEAFSAFMKGKHSKQEYHIQLIKALLQLPIYLQKEKMEHDIYSFLSLD
LFLKPTSVHYQKNAGEVKNALQELNQFARKNYFGNWLEIYQAAMSQVNLEGHFQINGNIK
KENKGVRLLTIHAAKGLEFDYVFLSGANSGIIPLDRKKEGHDYLKEEKRLLFVALTRARN
HMEISWHTQSSAWNAQEGPSYFLNSIPSTLVERIDTKTSVIKEPEKQQVAETNDKWQKNM
KIKHPKYGEGIILSSNLNEITCNFDKFGKKSFAAAWASIVKI
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
ttgagtttaaagaatctacatagaaaattaggcatcaaccatcagtctggagatgaattc
gatccaattgcggccttcgaggcagaagatttacctgaaaatctgaacctaattccacct
gaacgatttaccgaacccaaagacaattacaagcaggagttaaaactcgtggcagaaaaa
aatgccagtttatctgcagctctcgagcatttgaatccttatcagcttcaagccattttc
agcgacgagcaaaaagttgtgctcagtgccatggtgggaagtgggaaaaccacggttcta
acttataaattactctaccttcattttataaaaggcataccgctttcgcagatggccgta
cttacctttaccaataaagctgcccgcgaaatcagagagcgtatcctctctttttatgga
gataaaatgattccaagcagtcaggaattaagatattttggcacctttcattccatggca
cgccaattactcaaagagcatcctaaattacaggacttgggctttaccccctctttttcc
attatggatcaagaagcaaaagaagattttctccaccgtttaattctaagtcatgagttg
aatgtgaaatatcaaaacaagctggataaacgattaaaattgtatcgtcacgagaagcag
attctctatggaaacatgaagtatcctgacgatttgccacaattgctgcaattatcgcgt
gaggagaaacaagccaataatttgatggattttgatgaccttatttccattgtaaattgg
ttacttcatcgcgacaaatcctttctgccacagtggattattgtagatgagtttcaggat
tgtaacgaagatcaattggaatttatcaatcatttaagcaataaagacactagcttttta
gccgtaggcgatccaaatcaaagtatttatgcctggcgaggaagcacaagtaaaatcttg
caaaactatgtggctgactcttcttgctgcatgatgcgtttgcctctaaactacagaaca
tcaagccaactgctcgatgccgcagcttgtctgctccaaaaagacgataataatttgcag
gcaactcgtcctgaaggaaaaaaactgatcattcgaaatcatttcgatgatcatcaagaa
gcccattatttggtgcaaaaatgccgagaattgaaccaaaccggaacaccatgggaagag
attgctctcttgtttcgtacccgccaacaaatcggcctattcgaaaccatttttacaaaa
gaaggtattccttgcgaaatgctaagcaaaaccagtttaagagaacaacccgctctcttt
tggttacaaagaattatgcttgccgcatttcatccaaacgactttgacagcattcttcag
gtttttacgtcgacggagttcggatgtttaaaaatgggtaaaagtttgattactgcttat
cagaaatttacatgggagaagaaatttgacacaaaactggaggctttctcggcatttatg
aagggaaaacacagcaaacaagagtatcatattcaattgataaaggcgctattgcagctg
ccaatttacctgcagaaggaaaaaatggaacacgatatttacagtttcctttcacttgat
ctattcttaaaaccaacttcagttcattatcaaaagaatgctggggaagtaaaaaatgca
cttcaagaattaaatcaatttgcacgcaaaaattatttcggcaattggctcgagatctat
caggcagccatgagtcaggtaaatttagaaggtcattttcaaatcaatggcaacataaaa
aaagaaaacaaaggtgtacgattgctcacgattcatgctgctaaaggtctggaattcgat
tatgtatttctaagtggagccaattcaggaattattcctttggatcgcaagaaagaagga
cacgattacctcaaggaagagaaacgcttgctatttgtagccttaactcgggcacgtaac
catatggaaatatcctggcacacgcaaagtagtgcttggaatgctcaggaaggtccttcc
tattttctcaattcgattcccagtactctagtagaaagaattgatactaaaacatcagtt
attaaagaaccagaaaagcaacaagttgcagagacaaatgacaaatggcaaaaaaacatg
aagataaaacaccctaaatacggtgaaggtattatccttagcagcaatctgaatgaaatc
acatgtaatttcgacaaatttggaaaaaagagttttgctgccgcttgggcttccatagtt
aaaatataa
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