Labilibaculum antarcticum: ALGA_3954
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Entry
ALGA_3954 CDS
T05376
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
mbas
Labilibaculum antarcticum
Pathway
mbas03030
DNA replication
mbas03430
Mismatch repair
mbas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ALGA_3954
03430 Mismatch repair
ALGA_3954
03440 Homologous recombination
ALGA_3954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbas03032
]
ALGA_3954
03400 DNA repair and recombination proteins [BR:
mbas03400
]
ALGA_3954
Enzymes [BR:
mbas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ALGA_3954
DNA replication proteins [BR:
mbas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ALGA_3954
DNA repair and recombination proteins [BR:
mbas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ALGA_3954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_22
DNA_pol3_delta_C
AAA_5
RCF1-5-like_lid
AAA_30
AAA_14
AAA_2
AAA_24
AAA_16
AAA_assoc_2
DUF7597
AAA_18
AAA_19
AAA_7
GNAT_acetyltr_2
Mg_chelatase
ISOA1-3_C
Motif
Other DBs
NCBI-ProteinID:
BAX82246
UniProt:
A0A1Y1CP89
LinkDB
All DBs
Position
5056395..5058173
Genome browser
AA seq
592 aa
AA seq
DB search
MENYIVSARKYRPSIFSSVVGQQSITVTLKNAIKNNHLAHAYLFCGPRGVGKTSCARIFA
KTINCSNISSDFEACDECESCVAFNESRSYNIHELDAASNNSVEDIRTLIDQVRIPPQIG
SYSVYIIDEVHMLSASAFNAFLKTLEEPPAHAIFVLATTEKHKILPTILSRCQIFDFNRI
KVEDAVKHLKEIAIKESVIIEEEGLNVIAQKADGAMRDALSIFDQIVSFSGKEISFENVI
QNLNVLDYDYYFKMVDAFLDGKVTDVLLMLNEIIEKGFDGHHFVAGLSAHIRDVLVGKDP
VTIQLLEVSDSVKQKYVDQSKKCPLDFLYEALKILNQCDISFKGSQNQRLLIELSLIQLS
QIIELKKKGLKLNLNSKKLQKIIVEGEAISAVVKQPEPQGNNGKATQTVSDTGQTYNSKK
EKSKGVTVSPKSNFASSVSIKQAMNSGNTRSTNAAKPIDKKAISFAEVVVVGNEPITQEK
VEAKLKEYIIAKGKSDRIRLAITVNKPKILDSNRVVLMVSNPLQEDDVIAVKNEVRNYLK
KELNNSEIQIETEIIQIITEKRMYTDSDRFNYLCEKNPALGLLKHKFALDFE
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggagaattatattgtttcagcacgtaaatatcgcccttcgattttttcatcggtagta
ggccagcaatccattacggttacccttaaaaatgctattaagaacaatcatctggctcat
gcctatttgttttgtggccctcgtggcgttggcaagacctcatgtgcccggatatttgca
aaaacaattaattgttcaaatataagttccgattttgaagcatgtgatgaatgtgaatca
tgtgttgcctttaatgagagtcgctcatacaacattcacgagctagatgcagcttccaat
aattcagttgaagatattcgtactctgattgatcaagttcgtatacccccacaaattgga
agttatagtgtttatattattgacgaggttcacatgctttcggcatcggcatttaatgct
tttctgaaaactttagaagaacctccggctcatgccatattcgttttagcaactaccgaa
aaacataaaatacttcctacaattctatctcgttgtcagatatttgattttaatcggatt
aaggttgaggatgccgttaagcatttaaaagaaatagcgataaaagaatctgttataatc
gaggaggaaggtttaaatgtaatcgctcaaaaggcggatggagccatgcgcgatgctctt
tctatttttgatcagattgtaagtttttctggaaaagaaatatcttttgaaaatgtaatt
cagaatttgaatgttttggattacgactactattttaaaatggtagatgctttcctggat
gggaaagtaacagatgtgcttctgatgcttaatgaaattattgagaaaggatttgacggt
catcattttgttgctggcttaagtgctcacattcgggatgtattggttgggaaagacccg
gtaaccattcagttgctcgaggttagtgattcggtaaaacaaaaatacgtagatcagtcg
aaaaagtgcccgcttgattttttgtatgaagcactcaaaattttgaatcaatgtgatatc
agctttaaaggcagtcaaaaccaaagacttcttatcgaattaagcttaattcaattatct
cagataattgaattaaaaaaaaaaggacttaaattaaatctgaattcaaaaaaacttcag
aagataattgttgaaggggaggctattagcgctgttgttaagcaacccgaacctcaggga
aataatggtaaggcaacacaaacagtaagtgatactggtcaaacatataattcaaaaaag
gaaaagagcaagggtgtaactgtttcaccaaaatccaattttgcatcctcagtgtctatt
aagcaagcaatgaatagtggtaatacacgttcaactaatgcagctaagccaatagataaa
aaagccattagctttgccgaagttgtggttgttggtaatgaaccaatcacgcaagaaaaa
gttgaagcaaagctaaaagaatatataattgccaaagggaaaagtgaccgtatccgatta
gcaatcacagttaataagccaaagatattagattctaaccgtgtcgttttaatggttagt
aatcctttacaggaagatgatgttattgctgtaaaaaatgaggttcggaattatttgaaa
aaggaattaaataattctgagattcaaattgaaacagaaatcattcaaataataacagaa
aaaagaatgtatacagattctgaccgatttaactatttgtgtgagaaaaatccggcttta
ggactacttaaacacaaattcgccttggattttgaataa
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