Labilibaculum antarcticum: ALGA_3971
Help
Entry
ALGA_3971 CDS
T05376
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mbas
Labilibaculum antarcticum
Pathway
mbas03030
DNA replication
mbas03430
Mismatch repair
mbas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ALGA_3971
03430 Mismatch repair
ALGA_3971
03440 Homologous recombination
ALGA_3971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbas03032
]
ALGA_3971
03400 DNA repair and recombination proteins [BR:
mbas03400
]
ALGA_3971
Enzymes [BR:
mbas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ALGA_3971
DNA replication proteins [BR:
mbas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ALGA_3971
DNA repair and recombination proteins [BR:
mbas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ALGA_3971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF4411
DUF3479
DUF6139
Motif
Other DBs
NCBI-ProteinID:
BAX82263
UniProt:
A0A1Y1CQJ6
LinkDB
All DBs
Position
complement(5080410..5081000)
Genome browser
AA seq
196 aa
AA seq
DB search
MYLFFDTETTGLPKRWNAPVTDLDNWPRLVQLAWLLYDSRDNEIKRANRIIIPEGYIIPP
EASNIHGISTQKAIDEGIDLTEALNEFSKALNEADFLIAHNISFDEVIIGAEFLRKDIKS
RLIDIPKICTMKTTTNVCKIPGRSGYKWPNLTELHQFLFQKDFEGAHDALADVKACADCF
FELKKTGMYQVQGSLF
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgtacttatttttcgatacagaaacaactggtctacctaaacgttggaatgctccagtt
acagatttagataactggccaagactcgttcaattagcatggcttctttatgatagtcgc
gataatgaaataaaaagagcaaatagaatcattattcctgaaggatatattattcctcct
gaagcttctaatattcacggcatttcaacacaaaaagctattgatgaaggaattgatttg
actgaggcattaaacgaattctcgaaagcattaaacgaggctgattttcttattgctcac
aatattagcttcgatgaagtaattattggagccgaatttctaaggaaagatatcaaaagc
agattgattgacatccctaaaatttgtaccatgaaaaccacaactaatgtttgtaaaata
cctgggcgaagtggttacaaatggcctaatttgactgagcttcaccaatttttgtttcaa
aaagactttgaaggtgctcatgatgcactagcagatgttaaagcatgtgccgattgtttt
tttgagttaaaaaaaaccgggatgtatcaagtacaaggaagtttattttaa
DBGET
integrated database retrieval system
