Labilibaculum antarcticum: ALGA_4077
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Entry
ALGA_4077 CDS
T05376
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mbas
Labilibaculum antarcticum
Pathway
mbas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ALGA_4077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbas03400
]
ALGA_4077
Enzymes [BR:
mbas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ALGA_4077
DNA repair and recombination proteins [BR:
mbas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ALGA_4077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Helicase_RecD
Viral_helicase1
SH3_13
RecD_N
UvrD-helicase
AAA_22
SLFN-g3_helicase
ResIII
NTPase_1
nSTAND3
SRP54
AAA_29
UvrD_C
MukB
AAA_23
T2SSE
AAA_28
AAA_24
DUF87
AAA
DEAD
CbiA
AAA_16
AAA_7
NACHT
Motif
Other DBs
NCBI-ProteinID:
BAX82368
UniProt:
A0A1Y1CPJ9
LinkDB
All DBs
Position
complement(5229453..5231294)
Genome browser
AA seq
613 aa
AA seq
DB search
MKQGVDTHRVFADYFDDTEIKALAYAVSKNLSEGHICLDIGAYNDLITGKEESEIIEINP
FLQKSHLFCVDEIKKSSFVMNGDSETRPFVLQNGKLYLQRYFEYESEIIQQIKAFVENEE
RNLFKNRAILINQKEFIQTLFSSSDTVENLSLAERVNWQLVAGLSVIQKHISIITGGPGT
GKTTTVAKILAILYRDNPNLKVALAAPTGKAAARMKESLSQARDILPNLSQDVKDRFDDL
EAKTIHRLLGYKMNSPYFRHDAINKLDYDLIVVDESSMISAPLMAKLFAAVSPLTRIVLL
GDKNQLASVEAGSVFGDICLSLGEDMNRFSEENGAFMNSFISQADAQMSEKFIRTTPVVN
LMAEHIVELKRSHRFKSTEGIGLFSKALIQGSVSEKDYQDSENCQGEFVKVEENENSPIL
SELMIKYKRYICEENIAKALQYINDVRFLCAVHEGKYGVKHYNMLIAKFLQQKSLLSPQE
GFYENQPIIVTRNDYSLGLYNGDVGIIRNDENGVLKAWFEGVDGELKQVLPGFISAFDTV
FAMTIHKSQGSEFSSVAVILPGDEDLAILTRELLYTGITRGKKEVILFGSKTVINDAAQR
KVERASGIMERIQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagggagttgatacgcatagagtttttgctgattattttgatgatactgaaata
aaagcgttggcttatgctgtttctaaaaacttaagtgaaggtcatatttgtttggatatt
ggtgcttacaatgatttgattaccggtaaagaggaaagtgagattattgaaataaaccca
tttctacaaaagagccatttattttgtgttgatgagattaaaaaatcatcttttgtaatg
aatggagattcggaaacgagaccatttgttttacagaacggaaaactttatttacagcgc
tacttcgaatatgaatctgaaattattcaacagatcaaagcctttgttgagaatgaggaa
cgtaatctgtttaagaatagggcaattttaatcaatcaaaaagaattcattcagacgctt
ttcagttcatcggatactgtggagaatttgtcacttgcagaacgggtcaattggcaactt
gtcgcaggcttgtctgttattcaaaaacatatttctataattacaggaggacctggtact
ggcaaaacaactaccgttgccaaaattcttgcaattttatatcgcgacaatccaaatttg
aaagttgcattagctgcaccaacaggaaaggctgctgcacgaatgaaagaatccttaagt
caggctcgtgatattctgccaaatttgtctcaggatgtaaaggatcgatttgatgattta
gaagcgaaaaccattcacaggcttttgggatataaaatgaactccccttattttagacat
gatgcgatcaataaattggattacgatctgattgtagttgatgaatcgtcaatgatttcc
gctcctcttatggcaaagctatttgcagcggtttcccctttaactagaattgtattgtta
ggagacaagaaccaattggcatcggtggaagcgggcagcgtttttggcgatatctgcctc
tctcttggtgaggatatgaatcgcttttctgaggagaatggtgcatttatgaacagcttc
atttcacaagctgatgctcaaatgtcagagaaatttataaggactactcctgtcgtgaat
ttgatggccgaacatattgttgaattaaaaagaagtcatcgttttaagagtaccgaaggg
attggtttgtttagtaaagctcttatccagggaagtgtatcagaaaaggactatcaggat
agtgaaaattgccagggagaatttgtaaaggtagaggagaatgaaaactcgcctatctta
tccgaattaatgatcaaatacaaaagatacatctgtgaggaaaatatagcaaaggctttg
cagtatataaatgatgttcggtttttgtgtgcggtgcatgaaggaaagtatggtgtaaag
cattacaatatgctcattgcgaaattcctacagcagaaatctttattaagtcctcaggaa
ggattttacgaaaatcaacccattatcgtaactagaaatgattatagcttaggtctttat
aatggagatgtaggaatcattcgtaacgatgagaatggtgttttaaaagcttggttcgag
ggtgttgatggtgaattaaaacaagttttacccggtttcatatctgccttcgatacggta
tttgcaatgaccatacataaaagccaaggatcggaattttcctctgttgcggtcatattg
cctggcgatgaggatttagcaattctcactcgggaattactatacaccggaataacaaga
ggtaaaaaggaagtaatcctatttgggagcaagacagtgataaatgatgcggcgcagcga
aaagtggagagagcatcaggaattatggaacgaattcaataa
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