Labilibaculum antarcticum: ALGA_4172
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Entry
ALGA_4172 CDS
T05376
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mbas
Labilibaculum antarcticum
Brite
KEGG Orthology (KO) [BR:
mbas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbas03400
]
ALGA_4172
DNA repair and recombination proteins [BR:
mbas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ALGA_4172
Archaeal homologous recombinant proteins
ALGA_4172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
SMC_N
ABC_ATPase
DUF2072
ABC_tran
AAA_16
AAA_22
AAA_18
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
BAX82463
UniProt:
A0A1Y1CR48
LinkDB
All DBs
Position
5361873..5365430
Genome browser
AA seq
1185 aa
AA seq
DB search
MKITQLRIKNLNSLKEEHVIPFNQAPLSETGLFAITGPTGAGKSTLLDAISLALYNQIPR
SGKLSRNNIENFGTLITRGTSDCYAEVEYQVNGNSYRSKWSISRNRNHNLRDYEMELSQL
NPDGEWDILEQAKRLIPGRNAEITGLNYDQFVKSIVLSQGEFAKFLKANANERSELLEKI
TGTEIYRQIGKAAYAKLKEQEDFIAAINNKMQGIELLSPEDKTSIEGNAKTLKQELENLE
MQIKITKEQVSVRKQEAEWKLSLDKNKTDEEELRKEITAFTPLLQQLEQHNKLIHSKGDL
QQNIQQELQIKQLKKQIEEYKAEIEKKKKELEQSKEQLKNDLENEKTVVKEREQLRPILS
KVSQLDEQLKMLANQVKERKAELDLAVRTNKELKTKQEQYNFDLKGCGKSKEEIEKILER
DKALEEVPVLLPLVNQQLDQIKRTYSKLEEEAAALKSTELRDQIRKGSNWAQKIDLLQVK
IDDVKAQLIPIEKELEKANFTNREELNQQLTQASRKSKSLEQLESLQKYYLKDHQENKEL
HLQLKANNRSIELAANLLKDQKPKLKVLELKEEEVSIRLQRLQLESSLEDKREQLVAGEA
CPLCGSTHHPYVKSYENKSEESKKEKQQLQTELKKLASEIETKQKELILLEADNKSILNR
LEKVKILLNENSKAFEEEQLKIKTELTVMDQDALKIIAGEHKIWARQIELSAKNFDSREN
MLQNLQVMAPLLEKVKLIAEAQEQSEASLCNLQHFIQNETNLKSKLEALHALHLGYQNKK
EELLHQDKNILRLNELIKAGLENIQIANKDAEQKTANLNKLAKNKLDVEQERKLLLGDKL
PAEEQEKIDKKLELASAKLQDSSKKEVSIKQNITYLQEQTDKETKNASKLEIAYAEEFKR
LLALVQKHSFDSLELAMNAILPEGKAAEIKNRQDALQNRETARKQSEKDLQEALAKIKLK
LTAIATEELLEKEKQEDAQLGDANKSLGAFEQQLKQDKENRKRAGSLLTELEVQRKEVKR
WANLNELIGDATGNKYSKFAQELTLQQMLSLANLHLMKLDQRYLLKYNPQQNEDLFVVDT
LQGNEERSVRTLSGGESFLISLALALGLSDLAGQNTQLETLFIDEGFGSLDQVTLELALC
TLERLQAESNRTIGIISHVEALKERISTQIELVKDSAGNSHIEIR
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgaagattacccaattgagaataaaaaacctgaactcgttaaaagaggaacacgtgatc
ccttttaatcaggccccactgagtgaaacaggtttatttgccattaccggcccaacggga
gcaggcaaaagcactttacttgatgccatcagccttgccctgtacaatcaaattcccaga
agcggcaaactatcgagaaacaatattgaaaatttcgggactcttatcacacgcggcaca
tccgattgttatgccgaagtggaataccaggtaaatggcaatagctaccgatcaaaatgg
agcattagccgaaacagaaatcacaatctccgcgattacgaaatggagctttcccaattg
aacccagatggtgaatgggatattctggagcaggcaaaaagacttattcccggcagaaat
gcagaaataacagggcttaattacgatcagttcgtaaaatcgattgttttatcgcagggt
gaatttgccaaatttctgaaagcaaatgccaatgaacgttccgaattgttggagaaaatc
accggaaccgaaatttaccggcagattggaaaagcggcctatgccaagctaaaggaacaa
gaagattttattgccgctatcaataataaaatgcagggtattgaactgctaagcccggaa
gacaaaaccagtatcgaagggaatgctaagaccctaaaacaagagctggaaaatttagag
atgcaaatcaaaatcaccaaagagcaggtctctgttcgaaagcaagaagcagagtggaag
ctttcccttgataaaaacaagacggatgaagaagaacttcgaaaggagattacggcattt
acgcctctcttgcagcaacttgagcaacacaacaagttaattcatagtaaaggggatttg
cagcaaaacatacaacaggagctgcagattaagcagcttaaaaaacagattgaggaatac
aaagcagaaatagaaaagaagaagaaagagctggagcaaagtaaggaacagctgaaaaac
gatcttgaaaatgagaagactgtggtaaaagaacgggaacaattgcgtcctatcctcagt
aaagtctctcagttggatgagcaattaaaaatgcttgcaaatcaggtgaaagaacgcaag
gcagaattggacctggccgttcgaacaaacaaagaattaaaaaccaaacaggagcaatac
aatttcgatttgaaaggctgtggaaaatcgaaagaggaaatagaaaaaatattggaaagg
gacaaagctcttgaagaggttcctgtcctattgcctttggtgaatcaacaactggatcag
ataaaaaggacttactcgaaactggaagaggaagccgcagcattaaaaagcacagaatta
cgcgatcaaatccgtaaaggcagcaattgggcgcaaaagatagacctgctgcaagtaaag
attgatgatgttaaggcgcagctgatcccgattgagaaagagctggagaaagcaaatttc
accaacagagaggagttgaatcagcaattgacgcaggccagtcgaaaaagcaagagcctt
gagcagctggaaagcctgcaaaaatattacctcaaagatcatcaggaaaataaggagctg
catttacaattaaaagccaacaatcggtccatcgagttagcagcaaatcttttgaaggat
caaaagcctaaattaaaagtgcttgaactgaaagaagaagaggtaagcatcaggctgcag
cgtttgcaactggaatcttctttggaagacaaacgggagcaactggttgccggtgaagct
tgtcctttgtgtggttcaacacatcatccgtacgtaaaaagctacgaaaacaagagtgag
gaaagtaagaaagaaaagcaacagctgcagactgaactaaaaaagcttgcctcagaaatt
gagacaaaacaaaaagaattgattctgctcgaagctgataacaaaagcatactgaatcga
cttgaaaaagtaaagatcttgctgaacgaaaattcaaaagcctttgaggaagaacagttg
aaaatcaaaaccgaactgactgtaatggatcaggatgctctgaaaattattgccggagaa
cataaaatttgggcccggcaaatagagctttctgcaaaaaacttcgattccagagaaaac
atgcttcagaatttgcaggtgatggcgcccctactcgagaaagtgaaattgattgctgaa
gctcaggaacaaagcgaggccagtctgtgcaacttgcagcactttattcagaacgaaacc
aatctgaaatcgaaactggaggccttgcatgcacttcaccttgggtatcaaaacaaaaaa
gaagagcttttacatcaggataaaaatatactacggctaaacgaactgataaaagccgga
ctagagaacatacagattgccaacaaagatgctgaacagaaaacggcaaatttaaacaaa
cttgcaaagaacaaattggatgttgagcaggaacgaaagctattactaggcgataaattg
ccagcggaagaacaggaaaagatcgataagaagctggaactggccagtgctaagctgcaa
gacagctcgaaaaaggaagtgagcattaagcagaacataacctacttgcaggaacaaacc
gacaaggaaacaaaaaacgccagcaaactagagatagcctatgccgaggagttcaaacga
ctactagctcttgttcagaaacattcttttgacagcttggagcttgccatgaacgccatt
ttacccgaggggaaagcggccgaaattaagaacagacaagatgcccttcagaatagagaa
accgcccgtaagcaaagtgaaaaagacctgcaggaagcactagccaaaattaaattgaag
cttacagcgattgctaccgaagaacttctggaaaaagaaaagcaggaagatgctcaattg
ggagatgccaacaaaagtttaggtgcctttgaacaacaactaaagcaagacaaggagaac
cgaaaacgtgctggtagtcttttaacagaactggaagtgcaaagaaaggaagtgaaacga
tgggccaatttgaatgaattaattggcgatgctaccggaaataagtacagcaagtttgct
caggaactaacgcttcagcagatgttgagtttggccaatttgcatctgatgaaactggat
cagcgctacctcttaaaatacaatccgcagcaaaacgaagacctttttgtggtggatacc
ctgcaaggcaacgaggaacgatcggttcgcaccctatcgggcggtgagagtttcctgatt
tcgctggccttggccttgggcttatcggatttggcaggacaaaatacccaactggaaacc
ctctttattgatgaaggattcggaagtttggatcaggtaaccctggaactggccttgtgc
accttagagcgcttgcaagccgaaagcaaccgcaccattggtatcattagtcacgtggaa
gctttaaaggaacgcatcagcacccaaatagagctggtgaaagatagtgctggcaacagc
catattgaaatcagatga
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integrated database retrieval system
