Candidatus Methylopumilus planktonicus: BN1208_0004
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Entry
BN1208_0004 CDS
T03869
Name
(GenBank) Transcriptional regulator, LysR family
KO
K04761
LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
Organism
mbat
Candidatus Methylopumilus planktonicus
Brite
KEGG Orthology (KO) [BR:
mbat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mbat03000
]
BN1208_0004
Transcription factors [BR:
mbat03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BN1208_0004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
CEZ18902
UniProt:
A0A0D6EUG1
LinkDB
All DBs
Position
1:5360..6259
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AA seq
299 aa
AA seq
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MTLSELRFVVAVAKEKNFRRAANKCFVSQPALSLAIKKLEEELNVSLFERNRTEVTITEI
GEKIVEQANIILEQVEKIKSFAKSGGDPLDGLIKVGMIHSVGPYLLPQIIPILRKIAPKM
PLEVEENITASLELQLKNGQIDAAIVALPFNIPGIHVLPLYKEEFVVAVPNNHPWATRKN
IHPKELSDEKVLLLNSGHCFSLQVIESCPDLSKKGEVLQGNSLETIRNMVASNLGITVLP
KSATSDRYQNYLIKVIPFIKPVPSRTIAIAYRKSFVRMKAVEKISEAVRLIKTDTIEMI
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgacgctaagcgaattaagatttgtagtggccgtggctaaagagaaaaattttcgacgt
gccgcaaataaatgttttgtgagtcaacccgctttaagtttagcaattaaaaaactagaa
gaagaactgaatgtttctttattcgagagaaatcgcaccgaagttactattactgaaatt
ggcgaaaaaattgttgagcaagccaatattattctagagcaagttgaaaagataaaatca
tttgccaaatctggcggtgaccccttagacggattaataaaagttggcatgattcattcg
gtcggcccttacttgttgccgcaaattattcctatcctaagaaaaatcgctccaaaaatg
ccgctagaggttgaggaaaatattaccgcgagtctcgagctacaattgaaaaatggacaa
attgacgcagcgattgtggcattgccatttaatattccgggtatacatgttctgccgctt
tataaagaagaatttgttgtggctgtgccgaataaccatccttgggcaacacgtaaaaat
attcatccaaaagaattaagcgacgaaaaagtattacttttaaatagtggacattgcttt
agtttgcaagtgattgagtcatgcccagatttatctaaaaaaggtgaggtgctccaagga
aattcacttgaaacgattcgtaatatggtggcatcgaacttagggattactgtgttgcca
aaaagtgcaacctcagaccgctatcaaaactatttaataaaagtaattccttttattaag
cctgtgccttcgagaacaattgcaattgcttatcgaaaaagttttgtacgaatgaaagcc
gtagaaaaaatctcagaggcagtacgattgattaaaacagatacgattgaaatgatataa
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