Candidatus Methylopumilus planktonicus: BN1208_0063
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Entry
BN1208_0063 CDS
T03869
Symbol
nusA
Name
(GenBank) transcription termination/antitermination L factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
mbat
Candidatus Methylopumilus planktonicus
Brite
KEGG Orthology (KO) [BR:
mbat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbat03021
]
BN1208_0063 (nusA)
03009 Ribosome biogenesis [BR:
mbat03009
]
BN1208_0063 (nusA)
Transcription machinery [BR:
mbat03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
BN1208_0063 (nusA)
Ribosome biogenesis [BR:
mbat03009
]
Prokaryotic type
rRNA transcription factors
BN1208_0063 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
S1
KH_2
DUF4332
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
CEZ18959
UniProt:
A0A0D6ET80
LinkDB
All DBs
Position
1:67583..69049
Genome browser
AA seq
488 aa
AA seq
DB search
MSREILLLVDALAHEKNVNKDVVFEALESALASATKKKNTEDIDVRVEIDRDTGEYKSFR
RWTFLNDELIENEHAQISLLDPRAEGKVENDTIEVPLESIEFGRIGAQAAKQVILQKVRE
AEREQILEDFLGRNEKLVTGVIKRMDRGNGIIEVGRIEAVLPRDQMIPKENLRIGDRVRA
YLTNVERSHRGPQLILSRTAPEFLVRLFELEVPEIEEGLLEIKSASRDPGLRSKIAVKAN
DQRIDPVGTCVGMRGSRVQAVTGELAGERVDIVLWSMEPAQFVINAMAPAEVSSIVVDEE
KHSMDVVVNEENLAQAIGRNGQNVRLASELTGWNINILTEEESSKKNEEEYASTSQLFMA
KLDVDEDVADILVQEGFSTLEEIAYVPLQEMLEIEAFDEDTVNELRSRARAALLTEAIAK
EEKVEEAAEDLLTMEGMDDATANLLASKGISKMDDLADLAVDELVEMTSMDEERAKQLIM
TARAPWFV
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcgagattttattgttagtagatgctttagcccatgaaaaaaatgtgaacaaa
gatgtggtctttgaggctcttgagtcagccttggcttcagctacaaagaaaaaaaataca
gaagatattgatgtgcgcgttgaaattgatcgtgacacaggtgaatataaatcttttaga
cgttggacttttttaaatgatgagctcattgagaatgaacacgctcaaatttctcttcta
gatcctcgcgctgaaggcaaggttgaaaacgatacgattgaagtgcctttggagtcgatt
gaatttggacgtatcggcgcacaagctgcaaaacaagtcatcttacaaaaagtacgcgaa
gctgaaagagaacaaattttagaagatttcttgggccgcaatgaaaaattagtcaccggt
gtaatcaaacgcatggatcgcggcaatgggatcattgaagtgggtcgtattgaagcggtc
cttccccgcgatcaaatgattcctaaagaaaatttacgtattggcgatcgtgtaagagcc
tatctgacaaacgttgaaagaagtcatcgcggaccacagcttattttatctagaacagca
cctgaatttcttgtgcgtttatttgaacttgaagtaccagaaattgaagaaggcctgcta
gaaattaaatcggcatcacgtgacccagggttgcgttcaaaaattgctgtgaaagcaaac
gatcaaagaattgatccagtaggcacatgtgtaggtatgcgaggatcaagggttcaagca
gtgacaggtgaacttgcaggagagcgtgtcgatattgttttatggtccatggagccagca
cagtttgtgatcaatgcgatggcaccggctgaagtttcaagcattgtggtcgatgaagaa
aaacacagtatggatgttgtagtgaatgaagaaaatttagcgcaagcaattgggcgaaat
ggacaaaacgttcgccttgcctccgagctcacaggttggaatattaatattctgacagaa
gaagagtcctctaagaaaaatgaagaagaatatgcaagtacgagccaattattcatggcg
aaacttgatgtggacgaagatgtggccgacattcttgtgcaagaaggatttagcacgcta
gaagaaattgcttatgtgccattgcaagagatgttagagatcgaagcgttcgatgaagac
acggtgaatgaacttcgttcgcgcgcacgtgcagctcttctcactgaagcgattgcaaaa
gaagaaaaagttgaagaagcggcagaagaccttctcacaatggaaggcatggatgacgct
acggctaaccttcttgcttcaaaaggtatttcgaaaatggatgatcttgcagatcttgct
gtagatgaattggttgaaatgacttcaatggatgaagagcgtgcgaaacagttaatcatg
actgctagagcgccttggtttgtttaa
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