Candidatus Methylopumilus planktonicus: BN1208_0066
Help
Entry
BN1208_0066 CDS
T03869
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mbat
Candidatus Methylopumilus planktonicus
Brite
KEGG Orthology (KO) [BR:
mbat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mbat03016
]
BN1208_0066 (truB)
Enzymes [BR:
mbat01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BN1208_0066 (truB)
Transfer RNA biogenesis [BR:
mbat03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BN1208_0066 (truB)
Prokaryotic type
BN1208_0066 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DUF2972
Motif
Other DBs
NCBI-ProteinID:
CEZ18962
UniProt:
A0A0D6EUK9
LinkDB
All DBs
Position
1:71947..72849
Genome browser
AA seq
300 aa
AA seq
DB search
MQKKSTKREIDGVFLLNKPLGFSSNQALKKIQWLFNAKKAGHTGTLDPMASGLLPICLGE
ATKFSHRLLNANKTYIATIQFGVTTTTGDQEGEVISEKEVVFNEVQLKETLQKFIGDITQ
IPPMYSALKFEGKPLYEYARKGIEIERKSRQITIYDIKLIKVEGSVTTIEVFCSKGTYIR
TLAEDIGEALGCGAYLKGLERTQTGNFQLSDALSIEALEAIAVASREKILLPIDALLEGL
SSIELTSTETEAIKKGQSIDFISKNEEELRLYSASGKFLGVGQPDLQGHLLPKRLIANIL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagaagtctacgaagcgcgagattgatggcgtttttttactcaataagccactt
ggattttcatccaatcaagccttaaaaaaaatccaatggttatttaatgcaaaaaaagca
ggacacacaggcacgcttgaccctatggcctcagggcttcttcctatttgcttaggtgag
gctacaaaattttcacaccgtcttcttaatgctaacaaaacttatatcgcaacaattcaa
ttcggcgtgaccactacgacaggcgatcaagaaggtgaggtgatttcagaaaaagaggtt
gttttcaatgaagtccaattaaaagaaacgctgcaaaaatttataggcgatattacacaa
atacccccgatgtattccgcattgaaatttgaaggcaagcccctctatgaatatgcaaga
aaagggattgaaattgaacgcaaatctagacaaattaccatctatgacatcaagcttata
aaagttgaaggcagtgtcacgacaattgaagttttctgcagcaaggggacttatattcgt
actttggcagaagatattggggaagcactagggtgtggcgcttacttaaagggcttagaa
agaacccaaacgggcaattttcagttgtcagatgccctctcaatcgaagctctcgaagct
atagccgtcgcatctcgagaaaaaatacttttgcctatcgatgcattattagaagggcta
tcctcgattgagctgacttcgactgaaacagaagcgattaaaaaagggcaaagcattgat
tttattagtaaaaatgaagaagaattacgcttatatagcgcttcaggtaagtttttaggg
gtgggccagcccgaccttcaaggacacctgcttcctaagcgcttaatagcaaatatatta
taa
DBGET
integrated database retrieval system
