Candidatus Methylopumilus planktonicus: BN1208_0106
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Entry
BN1208_0106 CDS
T03869
Symbol
xerC
Name
(GenBank) site-specific tyrosine recombinase
KO
K03733
integrase/recombinase XerC
Organism
mbat
Candidatus Methylopumilus planktonicus
Brite
KEGG Orthology (KO) [BR:
mbat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mbat03036
]
BN1208_0106 (xerC)
Chromosome and associated proteins [BR:
mbat03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
BN1208_0106 (xerC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Int_N
Motif
Other DBs
NCBI-ProteinID:
CEZ19002
UniProt:
A0A0D6EUR5
LinkDB
All DBs
Position
1:complement(103560..104450)
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AA seq
296 aa
AA seq
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MEHNHFQKSYIDYLTFEKGLSSNSIKSYVHDLAQLVVLIEHDRFESFTIQDIRRASAKLN
SRGLHGKSIARMLSAWRGFFNYLIERHQFKENPVKDVHAPKSAKTLPQTLSIEQIVKLVS
IDDTSLLGLRDKAFLELFYSSGLRLSEVVNVNINDLDLQEGIITVIGKGNKTRMVPIGQK
AIHAIQCWIEKRAAIKTEDKSVDALFITERGKRMSARAIQYRIQMWAIKQGIDSTVHPHL
LRHSFASHMLQSSQDLRAVQEMLGHANISTTQVYTHLDFQHLASIYDKAHPRAKKK
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggaacataatcacttccaaaaaagctatatcgattaccttacctttgaaaaaggtctt
agcagcaactcaattaaaagttacgtgcatgatcttgcccagcttgtagtccttattgaa
catgatcgttttgaatccttcactatccaagacatcagacgtgcaagtgctaaactgaat
agccgaggactccatggcaaatcaatcgcacgtatgttatccgcatggcgaggatttttt
aattacctaattgagcgccaccagtttaaagaaaaccccgtcaaagatgttcatgcacct
aagagcgctaagacattgccgcaaactttatcgattgagcagatagttaaactcgtttcg
attgatgacacctcattattaggcctaagagataaagcctttttagaattattttattca
tccggattacgtttaagtgaagtagtgaatgtcaatatcaacgatctcgatcttcaagaa
ggcatcatcactgtcataggtaaaggcaataaaacgcgtatggtccccataggccaaaaa
gctatccatgccattcaatgctggattgaaaaacgcgcggctatcaaaacagaagataaa
tcggtggatgctttatttattaccgaacgaggaaaacgtatgtcagcccgagctattcag
tatcgcattcaaatgtgggctatcaagcaaggtattgatagcaccgtccaccctcattta
ttaaggcatagttttgcctcacacatgttgcaatccagtcaagatttaagggctgttcaa
gaaatgttaggtcatgccaatatcagtaccacacaagtttatacccatctagactttcag
catcttgcaagtatttacgataaagcacatccaagagccaaaaagaaatag
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