Candidatus Methylopumilus planktonicus: BN1208_0161
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Entry
BN1208_0161 CDS
T03869
Symbol
ydaO
Name
(GenBank) putative C32 tRNA thiolase
KO
K14058
tRNA 2-thiocytidine biosynthesis protein TtcA
Organism
mbat
Candidatus Methylopumilus planktonicus
Brite
KEGG Orthology (KO) [BR:
mbat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mbat03016
]
BN1208_0161 (ydaO)
Transfer RNA biogenesis [BR:
mbat03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
BN1208_0161 (ydaO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP_bind_3
ManC_GMP_beta-helix
Motif
Other DBs
NCBI-ProteinID:
CEZ19056
UniProt:
A0A0D6ETW7
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All DBs
Position
1:complement(156689..157591)
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AA seq
300 aa
AA seq
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MITQVPIDATNNFLKLRNKLIGLTGKAITDFNMIENNDRVLVCMSGGKDSYSLLMFLLAL
KERAPIHFDIIAMNLDQKQPGFPADVLPNFLKNLGVEHLIITEDTYSIVKEKIPSGKTTC
SLCSRLRRGIIYRTAKELNINKIALGHHRDDIVETLFLNMFFGSKLKAMPPKLISNDSKN
IIIRPLAYCSEKEISSYASRMNFPIIPCNLCGSQENLQRKKIKGMLIEWEKEQPGRVNNI
YKAISNVEPSHLGDRRLYDFENLNQSSKEEKDDLLFTEDLIRNLNADLNNFAFFTENIAS
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgattacgcaagtgccaattgatgcaaccaataactttctcaaattgcgcaataaactt
attggcttaactggcaaagcaataactgattttaatatgattgaaaataatgatcgagtc
ctcgtatgtatgagcggtggaaaagattcatattcattgctgatgtttttactagctcta
aaagagagagcgcctattcattttgatattattgcgatgaatttagatcaaaaacaacca
ggatttccagcagacgtattgcctaattttttaaaaaatttaggcgttgaacatcttatt
attactgaagacacctattcaatcgttaaagaaaaaataccaagtggtaaaactacttgc
tctttatgttctcgtttaagacgcggaattatttataggacagcaaaagaacttaatatt
aataaaattgctttgggccatcatcgtgatgatattgttgagacactttttcttaatatg
ttttttggttctaaattaaaagcaatgccaccaaagctaatctccaatgatagtaaaaat
attattattaggcctttagcttactgctcagaaaaagagatctcaagctatgcgtctcga
atgaattttcctattattccttgtaatttatgtggctcacaagaaaatcttcaaaggaaa
aaaataaaagggatgttgatagaatgggagaaagagcaaccgggacgagttaacaatata
tataaagccatatctaatgttgaaccctcacacttaggagaccggcgactatatgacttc
gaaaatcttaatcaatccagcaaagaagaaaaggatgaccttctttttacggaagactta
atcagaaatcttaatgcagacttaaataattttgctttttttacagagaatattgcctct
taa
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