Candidatus Methylopumilus planktonicus: BN1208_0578
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Entry
BN1208_0578 CDS
T03869
Name
(GenBank) conserved protein of unknown function
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
mbat
Candidatus Methylopumilus planktonicus
Brite
KEGG Orthology (KO) [BR:
mbat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbat03400
]
BN1208_0578
Enzymes [BR:
mbat01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
BN1208_0578
DNA repair and recombination proteins [BR:
mbat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
BN1208_0578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
SMRP1
DUF7229
Motif
Other DBs
NCBI-ProteinID:
CEZ19465
UniProt:
A0A0D6EUS3
LinkDB
All DBs
Position
1:complement(502379..503908)
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AA seq
509 aa
AA seq
DB search
MKILRLILGDQLNPNHSWFKNTDDEILYVLMEVKQETNYVLHHAQKILAIFAAMRDFKIT
LTKENHQVIYFKINEKSNQQSFKLNLNPLLTQYNIQKFEYLEPDEFRLDRDLREFCSEIS
IPSECFSSEHFYTHRSEVNEMFTDKKQWLMESFYRYMRKRHNVLMSEDGKPVGSKWNFDH
ENRKAWKGEPKVFEDHRPTHNHSELWNEITEAKIKSFGNHNASKFRWPLNRKEALKHLDF
FIRNILIYFGDYQDAMHKDETRMFHSLISFALNTKMLSPKEVVSAVEKSYLSNQLSINAA
EGFIRQIIGWREYIRGYYWAHMPAFGDQNYFNHQLPVPNWFWNGKTKMNCLKYTINQSLD
DAYAHHIQRLMIVGNFSLLVGINPKSLHEWYLGIYIDAFEWVEMPNTLGMSQFADGGKLA
SKPYVSTANYISKMSNYCEGCYYSKSERLGDKACPFNSLYWNFFISKSKQLGKNPRLAIV
NKQIRDMDPNLIKDIQLQAKKIIKNIESV
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcttagacttattctgggtgatcaactcaatcctaatcattcgtggtttaaa
aatacagatgatgaaatcctttacgttttaatggaggtaaaacaagaaacaaattatgtg
cttcatcatgcacaaaagattttagctatctttgcagcaatgagagattttaaaataacg
cttaccaaagaaaatcaccaagtcatttatttcaaaataaatgagaagtccaatcaacaa
tcttttaagttaaatttaaatcctttattaactcaatacaatattcagaaatttgagtat
ctagaacctgacgaattcaggcttgatcgtgatttaagggaattttgttctgaaatctct
attccatctgaatgtttttcatcagaacatttttatacccatcgctccgaagtaaacgaa
atgtttactgataagaagcagtggcttatggagtctttttatcgctatatgagaaaaagg
cacaatgttttgatgtctgaagatggtaaacctgttggttcaaaatggaattttgatcac
gagaatagaaaagcctggaagggtgaaccaaaagtttttgaagatcatagaccaactcat
aatcatagtgaattatggaatgaaattacagaagctaaaattaagagttttggaaatcac
aatgcatctaaatttcgttggcctttaaatagaaaagaagcattaaagcatttagatttt
tttattcgaaatattttaatttacttcggcgactatcaggatgcgatgcataaagatgag
acaaggatgtttcactccttaatctcttttgcattgaatactaaaatgctatcacctaaa
gaagttgtatcagctgtcgaaaaatcatatctttctaatcaattatctatcaatgctgct
gaaggctttatcagacaaattattggctggagagaatacattagaggatattactgggct
catatgccagcatttggcgaccaaaattattttaatcatcaattgccagtgcccaattgg
ttttggaatggcaaaactaaaatgaattgccttaaatatacaatcaaccaatcgctagat
gatgcttatgctcaccatatccaaagacttatgattgttggtaatttttctctacttgtg
ggtattaatcctaaaagccttcatgaatggtatttaggtatctatattgatgcatttgaa
tgggttgagatgccaaacacacttggtatgagtcaatttgctgatggaggcaagctagca
agtaagccttatgtttcaacggcaaattatattagtaaaatgagtaactattgcgaggga
tgctattattcaaaaagtgagaggcttggtgacaaagcatgtccattcaacagcttatac
tggaatttttttatttcgaagtccaaacaattaggtaaaaacccaagattagcgatcgtc
aataaacagatcagagatatggatcctaatctaattaaagatattcaattacaagcaaaa
aaaataatcaaaaatattgagagtgtctag
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