Candidatus Methylopumilus planktonicus: BN1208_0647
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Entry
BN1208_0647 CDS
T03869
Name
(GenBank) Lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
mbat
Candidatus Methylopumilus planktonicus
Pathway
mbat00330
Arginine and proline metabolism
mbat01100
Metabolic pathways
mbat01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
mbat00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
BN1208_0647
Enzymes [BR:
mbat01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
BN1208_0647
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
CEZ19533
UniProt:
A0A0D6EW83
LinkDB
All DBs
Position
1:complement(570172..572412)
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AA seq
746 aa
AA seq
DB search
MKFNFPVVIIDEDFKSENSSGLGIRVLAKAIEKENFEVLGVTSYGDLTSFAQQQSRASAF
ILSIDDEEFVEENQTALQQLKNFVDEIRYRNEEIPIFLHGETRTSRHIPNEILRELNGFI
HMHEDTPEFVARYIVREARTYLDSLAPPFFKALTHYAGDGSYSWHCPGHSGGVAFLKSPV
GQMFHQFFGENMLRADVCNAVDELGQLLDHTGPVGASERNAARIYNSDHLYFVTNGTSTS
NKMVWHSTVAPGDIVIVDRNCHKSVLHSIIMTGAIPIFLMPTRNHFGIIGPIPKKEFEWK
NIQDKIQKNPFITNKKDKPRVLTITQSTYDGILYNVEEIKEMLDGKIDTLHFDEAWLPHA
TFHDFYGDYHAIGADRPRCKDSLIFSTQSTHKLLAGLSQASQILVQDAEKNKLDREVFNE
SFLMHSSTSPQYSIIASCDVAAAMMEEPGGKALVEESLMEALDFRRAMRKVDIEWGSDWW
FKVWGPNDLSDEGLEDRDAWMLNANDHWHGFGDLADGFNMLDPIKATIITPGLNVDGEFS
LEFGIPASIVTKYLAEHGVIVEKTGLYSFFIMFTIGITKGRWNTLVAALQQFKDDYDKNQ
PLWKVLPEFIQKQPSYERIGLRDLCTQIHEIYKKHNIARLTTEMYLSDMVPAMKPADAFA
KMAHKEIERVAIDDLEGRITAVLLTPYPPGIPLLIPGERFNNIIVNYLKFARDFNEKFPG
FETDNHGLVKQKIDGKAHYFVDCVSI
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaactttcccgtagtcatcattgatgaagactttaaatccgaaaattcttct
ggacttggtattagagttttagcaaaagcgatcgagaaagaaaattttgaggtactaggt
gttacaagctacggtgacttaacatcatttgctcaacaacaaagtcgagcttctgcgttt
attctatcgattgatgatgaagaatttgtcgaagaaaatcaaaccgcgcttcagcaatta
aaaaatttcgtagatgaaataagatatcgcaacgaagaaattccaatatttctacacggt
gaaactagaacaagccgtcacatcccaaatgaaattttaagagagttaaatggctttatt
catatgcacgaggatacgccagaattcgttgcgcgctatattgtccgagaagcaagaaca
tatctagatagcctagccccaccattttttaaagcactcactcattatgcaggtgacgga
tcttattcatggcattgccctggccactcaggtggtgtagcttttctaaaatcacctgtt
ggtcaaatgtttcaccaattcttcggtgaaaatatgctgcgagctgacgtatgcaatgca
gttgacgagttaggacagttactcgaccatacaggccctgtaggtgcttccgagagaaat
gcagcgcgaatctacaattctgatcatctatactttgttacaaacggtacatcgacatcg
aacaagatggtttggcattcaacagttgctcctggtgatattgtaatcgttgatcgtaat
tgtcataagtcagtactgcattctattattatgacaggcgctattccaatcttcttaatg
ccaactcgaaatcacttcggtattattggccctattcctaaaaaagaatttgaatggaaa
aatattcaagataaaattcaaaaaaatccattcatcactaacaaaaaagataagcctcgt
gtactgactattacacaatcaacttatgatggcattctttataacgttgaagagattaaa
gaaatgttagatggaaaaattgacacacttcatttcgatgaagcttggttgcctcatgcg
acatttcacgatttttatggtgattatcatgcaattggtgctgatcgtccgcgctgcaaa
gatagcttaatcttctcaacacaatcgacacacaaacttttagcagggttaagtcaggca
tctcaaattctcgtccaagatgcagaaaaaaataaactcgatcgtgaagtctttaatgaa
tcatttcttatgcacagctctaccagtccacaatattcaattattgcaagttgcgatgtt
gcagcggcaatgatggaagaacctgggggcaaggctcttgttgaagagtcactaatggaa
gcgctagactttagacgcgctatgcgaaaagtagatattgaatggggatctgactggtgg
tttaaagtttggggccctaacgatttatcagatgaaggtctcgaagatagagatgcttgg
atgttaaatgctaatgatcattggcatggttttggtgatcttgctgatggcttcaatatg
cttgatcctattaaagcaactattattactccaggacttaatgttgatggagagttttct
ttagagtttgggatacccgcatctattgttacaaagtatttggcagagcatggagttatt
gttgaaaaaactgggctctactcattttttattatgtttacgattggtatcactaagggt
cgctggaatacacttgttgctgctcttcagcaattcaaagacgattacgacaagaatcaa
cctttatggaaagtgttgcctgagtttattcagaaacaaccaagttatgagcgcatcggt
cttagagatttatgtacacaaattcatgaaatttacaaaaaacataatattgcaagactt
acaacagaaatgtatctctcggatatggtgcccgcaatgaagcctgcagatgcttttgca
aaaatggcccataaagaaattgaacgtgttgcgattgatgatctagagggcagaattaca
gcagtgctactcactccttatccgcctggcataccacttttaattcctggcgagcgtttt
aataatattattgtaaattatttaaagtttgcgagagattttaatgaaaaatttcctgga
ttcgaaacagacaatcatggattagtgaaacaaaagattgatggcaaagcgcactacttt
gtagactgtgtttctatttag
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