Candidatus Methylopumilus planktonicus: BN1208_0715
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Entry
BN1208_0715 CDS
T03869
Symbol
gyrA
Name
(GenBank) DNA gyrase (type II topoisomerase), subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mbat
Candidatus Methylopumilus planktonicus
Brite
KEGG Orthology (KO) [BR:
mbat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbat03032
]
BN1208_0715 (gyrA)
03400 DNA repair and recombination proteins [BR:
mbat03400
]
BN1208_0715 (gyrA)
Enzymes [BR:
mbat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BN1208_0715 (gyrA)
DNA replication proteins [BR:
mbat03032
]
Prokaryotic type
DNA Topoisomerases
BN1208_0715 (gyrA)
DNA repair and recombination proteins [BR:
mbat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BN1208_0715 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
CEZ19601
UniProt:
A0A0D6EVS3
LinkDB
All DBs
Position
1:648254..650803
Genome browser
AA seq
849 aa
AA seq
DB search
MNQFAKETIPISLEDEMKRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDFN
KPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEIRMSKIAHELLEDIDKDTVNFGPNYDGSEQEPLIMPARIPNLLINGSSGIAVGMAT
NIPPHNLNEVVDACLLLLEKPESSIDALIKLIPAPDFPTAGIIYGTSGVKEGYRTGRGRV
VMRGRTHVEKLDKGNREALIVDELPYQVNKKTFIEKIAELVNDKKIEGISDLRDESDKSG
MRVVIELKRGENPDVILNNLYKQTQLQDSFGMNMVALIDGQPKLLNLKQILDAFLRHRRE
VTTRKTVFELRKARERGHMLEGLAVALANVDEMIKIIKAAPTPPDAKKELIARTWKSSVV
EAMLNGAAMEFSRPEGLSKEFGLTDSGYKLSDVQAQEILQLRLQRLTGLEQEKIVNEYKE
IMNVITDFLDILETPARVTAIIVDELKAIKDQYGDKRRSEIVENALDLSTEDLITPEDVV
VTLSHTGYIKSQVLDEYRAQKRGGRGKQAATTKDDDFIDKMFVANTHDNILCFSSRGQVY
WLKVYEVPQGSRTSRGKPIVNLFPLQEGEKINAILPIKEFDDKHYIFMATALGTVKKTPL
TDFSNPRKSGIIAINLDDNDFLIGAEITDGSNDIVLVSNGGKAVWFDEEDVRSMGRNTRG
VRGMKLQEDQQVLSLLIASDDQQSMLVATENGYGKRTVLSDFRHSGRATQGVKAIQVSER
NGLVVAAKLVNDEDEIMLITTGGVLIRTRVSEIRELGRATQGVTLINLGENEKLSGLEKI
VEADVDLEE
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaatttgctaaagagaccatcccaatcagccttgaagatgagatgaagcgctct
tatcttgactacgccatgagcgtcattgttggacgtgcacttccagatgtcagagacgga
ttaaagcctgttcaccgtcgtgtactttttgcgatgcatgagcttaataacgactttaat
aaaccttacaaaaaatcagcgcgtattgttggtgatgtgattggtaaataccatccacat
ggtgatacagctgtgtacgatacgattgttcgtatggcgcaggattttagcttgcgatat
atgttagtcgatggtcagggaaattttggctcagtggatggcgataatgctgctgctatg
agatatacggaaatccgtatgtctaaaattgcacatgagcttttagaagatattgataaa
gatacagtaaatttcggtcctaattatgacggctctgaacaagaacctcttattatgccg
gcgcgtattccaaatcttcttatcaacggaagctctgggattgctgtgggcatggcgacc
aatattccacctcacaatttaaatgaagttgtagatgcgtgtttattactgctagaaaaa
cctgagtcatcgattgatgcattgattaaattaataccagcaccagatttccctacagcc
ggtatcatttatggcacttcaggcgttaaagaaggctacagaacaggtcgtggtcgtgtt
gttatgcggggaagaacgcacgttgaaaagctcgataaaggtaaccgtgaagcattaatc
gttgatgaacttccgtatcaagttaacaaaaaaacattcatcgagaagattgctgaactt
gtaaacgataaaaagattgaaggcatttcagatttaagggatgagtcagacaaatcaggt
atgcgtgttgtgattgaattaaagcgcggagagaatcctgatgttattttaaataatctt
tataagcaaacacagcttcaagatagttttggtatgaacatggtagcgcttattgatggc
cagccaaaacttcttaacttaaaacaaattttagatgcctttttaaggcaccgtcgtgaa
gttaccacaagaaaaactgtatttgaattaagaaaagcacgcgaacgtggccacatgtta
gaaggtttagcagtcgcattagctaacgtcgatgaaatgattaaaatcatcaaggctgct
ccaacaccgccagatgctaagaaagaattgatagcgcgcacatggaaatcttctgttgta
gaggctatgttgaatggtgctgcaatggagttttctagacctgaaggattgtctaaagaa
tttggattgactgattcaggctataagttatcagatgttcaagcacaagaaattctgcaa
ttaagattacaacgcttaacagggttagaacaagaaaaaattgttaatgaatataaagag
attatgaatgttattacagatttccttgatattttagaaacacctgcaagagtcactgca
attatcgtcgatgaattgaaagcgattaaagatcaatatggtgataaacgtcgaagtgaa
attgtagagaatgctttagatttatccactgaagatttaattacacctgaggatgttgta
gtcacactttctcatacaggctatattaaatcacaagtattagatgagtatcgtgcccaa
aaaagaggtggcagaggcaagcaagcagcaacgacaaaagatgatgattttatcgataaa
atgtttgtagcaaatacacacgataatattctatgtttttcaagtcgtggacaggtgtat
tggttaaaagtttacgaagtcccacagggcagtcgcacaagtcgtggtaaacctattgtt
aatttattcccgctccaagagggtgaaaaaattaatgcgattcttcctattaaagaattt
gatgataagcattatatttttatggccactgcattaggtacagttaaaaaaacgccgctt
acagatttttcaaatccacgtaagtcaggcatcatcgcaattaatctcgatgataatgac
tttttaattggcgctgaaattactgacggatccaacgatattgttttagtctcaaatggc
ggtaaagctgtttggtttgacgaagaagatgtgcggagtatgggtcgaaatacccgaggt
gttcgtggtatgaaattacaagaagaccaacaagtactatcccttcttatcgcaagcgat
gatcaacaatctatgctcgttgcaactgaaaatggctatggaaaacgcactgttttatct
gactttagacattctggtcgggccacacaaggggttaaagcgattcaagtgagtgaacgt
aatggccttgttgttgctgcaaaacttgttaacgacgaagatgaaattatgttaattacg
acaggtggggtactcatccgaacacgtgtaagtgaaattcgtgaattaggtcgtgcgaca
cagggtgtcacattaattaatttaggtgagaacgaaaaattatcaggcctcgagaagatt
gtagaagctgacgttgatctagaggaatag
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