Candidatus Methylopumilus planktonicus: BN1208_0753
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Entry
BN1208_0753 CDS
T03869
Symbol
radA
Name
(GenBank) repair protein radA homolog
KO
K04485
DNA repair protein RadA/Sms
Organism
mbat
Candidatus Methylopumilus planktonicus
Brite
KEGG Orthology (KO) [BR:
mbat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbat03400
]
BN1208_0753 (radA)
DNA repair and recombination proteins [BR:
mbat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BN1208_0753 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
DnaB_C
Zn_ribbon_LapB
ChlI
Lon_C
AAA_22
AAA
TniB
SLFN-g3_helicase
GvpD_P-loop
AAA_16
NB-ARC
nSTAND3
AAA_14
Elong_Iki1
AAA_24
Peptidase_U57
NTPase_1
NPHP3_N
nSTAND_NTPase5
CobU
AAA_19
B12-binding
AAA_29
AAA_5
NACHT
zf-RING_10
DXP_reductoisom
TackOD1
YdiH
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CEZ19639
UniProt:
A0A0D6EW11
LinkDB
All DBs
Position
1:686767..688137
Genome browser
AA seq
456 aa
AA seq
DB search
MAKNKIAYVCTECGGQSTKWQGQCPHCMTWNTMVESIIEASVPSRYASLTQTSELKKLNE
VKMSAVYKRTTCISEFDRVLGCGFVPGGVVLIGGDPGIGKSTLLIQALSHMTNDKTQTPC
KVIYVSGEESPQQIAMRAKRLELEVSDIFILSEINLEKIIQSIEKNKPDVVVIDSIQTIY
SEELQSAPGSVTQVRECSAQLTRIAKQLEVSMILVGHVTKEGSLAGPRVLEHIVDTVLYF
EGDQNSSFRMVRAFKNRFGAVNELGVFAMTEKGLREVTNPSALFLSHHHEEVSGSCITVT
QEGTRPLLIEIQALVDNAHGASPKRLGVGLEQNRLSMLLAVLNRHGGIACFDQDVFVNAV
GGVKITEPGVDLAILCAIVSSFKDQPINQKAIIFGEVGLAGEVRPIQRGQERIKEAAKLG
FTRAIIPKANIAKQKIAGIEVLGIEYLSQALQLLKA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaataaaattgcatacgtttgtactgaatgcggtggccaatcaaccaaatgg
caaggtcaatgtccgcattgtatgacttggaatacgatggtagaaagtattatcgaagct
tccgtgcctagccgatatgcgtctttgacacaaacttcagaattaaaaaaactaaatgaa
gtgaaaatgtcagctgtttataaaagaacgacttgtatcagtgaatttgatcgtgtgctt
ggatgtggttttgttccgggcggtgtggttttaattggtggcgatccaggtataggtaaa
tcaacacttctcattcaagcactttctcatatgacgaatgacaaaactcaaacaccatgt
aaagtgatttatgttagtggagaagaatcgccgcagcaaattgctatgcgagcaaaacga
ctagagctcgaagtttcagatatttttatattgtctgaaattaatttagaaaaaattatt
cagtcgattgaaaaaaataaacccgatgtggttgttattgattcaattcaaacaatttat
tctgaagagttgcagtctgctcccggatccgtcacacaagtcagagagtgctctgcacaa
ttaactcgtatcgcaaaacaattagaagtcagtatgattttagtgggccatgtcacaaaa
gaaggttctctggcagggcctcgcgtgttagaacatattgttgataccgtgctttatttt
gaaggcgatcaaaattcaagctttagaatggtgcgtgcatttaaaaatcgttttggcgct
gtgaatgaacttggtgtatttgcgatgactgaaaaaggattgcgcgaagtcacaaatcca
tctgcattatttttatcgcatcatcatgaagaggtttctggatcgtgtattactgtaact
caagaaggtacgaggcctttgcttattgaaatacaggcacttgttgataacgcgcatgga
gcttcacctaaacgactgggtgtaggcttagagcaaaatcgactttctatgttgctagcc
gtgctaaatcgacatggtggcattgcatgtttcgatcaggatgtttttgtgaatgcagta
gggggcgttaagatcactgagccaggtgtcgaccttgctattctatgtgccatcgtttca
tcatttaaggatcagccaattaatcaaaaggcaatcatttttggtgaggtgggattggca
ggtgaggtgagacctattcaaagaggtcaagaaaggattaaagaagcagctaaattagga
tttacgcgagctattattccaaaagcaaatatcgcaaaacagaaaattgctgggattgag
gtgttaggtattgaatacctatctcaagctcttcaattactcaaagcataa
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