Candidatus Methylopumilus planktonicus: BN1208_0820
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Entry
BN1208_0820 CDS
T03869
Symbol
rluC
Name
(GenBank) 23S rRNA pseudouridylate synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
mbat
Candidatus Methylopumilus planktonicus
Brite
KEGG Orthology (KO) [BR:
mbat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mbat03009
]
BN1208_0820 (rluC)
Enzymes [BR:
mbat01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
BN1208_0820 (rluC)
Ribosome biogenesis [BR:
mbat03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BN1208_0820 (rluC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CEZ19705
UniProt:
A0A0D6EVF4
LinkDB
All DBs
Position
1:complement(753915..754907)
Genome browser
AA seq
330 aa
AA seq
DB search
MAQNTNLKNLFSDEKATFVLVDEASETQKIDNFLLKILKNVPKSHVYKILRSGEVRVNKK
RVDTTYRLMIGDQVRIPPIAIEVERTPHVIEPKQQQTDWLDTNIIYEDDALLAINKPSGY
AVHGGSGLNFGVIELIRHVRPKAKFLELVHRIDRETSGILLIAKKRSALVNMHDMMRHNR
IEKKYTMMVEGEWTESKKTVELMLKKTFTQGGERRVNVTEDEDDDSQNQMSKTIFYLKKS
LGPYTLLEAKLITGRTHQLRVQLAHLGFPILGDDKYGDFSLNKALQKKGLKRMFLHAFSM
KMKHPLTEEPLELRAPLPLELDAFLSQQAS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaaatacaaaccttaaaaatcttttttctgatgaaaaagctacatttgtcctt
gtggatgaagcaagcgagacacaaaaaatcgataattttctcttaaaaattttaaaaaat
gtgcctaaaagccatgtttataaaattcttagaagtggtgaggtgagggtgaataaaaag
cgagtcgacactacttatcgtctgatgatcggggatcaagtaagaatccctcctattgcc
atagaggttgagagaacgccgcacgttattgaacccaaacagcaacaaaccgactggtta
gacactaatattatttacgaagatgatgcgttattggcgattaataaaccaagcggctat
gctgtccacgggggtagtggacttaactttggtgtcatagaactgattcgacatgtaaga
cctaaagccaaatttttagagctcgttcatcgtattgatagggaaacctccggcatttta
ttgattgccaaaaagcgttcagcacttgttaatatgcacgatatgatgcgacataatcgt
attgaaaaaaaatacaccatgatggttgaaggtgagtggactgaatccaagaaaacagtc
gaacttatgctcaaaaaaaccttcacacaaggaggcgagagacgggtcaacgtgactgag
gatgaagatgatgatagccaaaatcaaatgagcaaaacgatcttttacttaaaaaaatct
ttagggccttacaccctccttgaagctaaacttattaccggaagaacccatcagcttaga
gttcagctcgcccacctaggattccctattttaggtgacgacaaatatggagatttttcc
ttaaacaaggcgctccaaaaaaagggcttaaaacggatgtttcttcatgcattctctatg
aaaatgaaacaccctttaactgaggagcctttggagttacgagcccctttgcccctggag
cttgatgcatttttaagtcagcaagcctcatga
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