Candidatus Methylopumilus planktonicus: BN1208_0823
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Entry
BN1208_0823 CDS
T03869
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
mbat
Candidatus Methylopumilus planktonicus
Brite
KEGG Orthology (KO) [BR:
mbat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbat03019
]
BN1208_0823 (orn)
03009 Ribosome biogenesis [BR:
mbat03009
]
BN1208_0823 (orn)
Messenger RNA biogenesis [BR:
mbat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BN1208_0823 (orn)
Ribosome biogenesis [BR:
mbat03009
]
Eukaryotic type
Pre-60S particles
RNases
BN1208_0823 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
CEZ19708
UniProt:
A0A0D6EWQ2
LinkDB
All DBs
Position
1:complement(758014..758574)
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AA seq
186 aa
AA seq
DB search
MEIMMSSSDDNLIWLDMEMSGLNTETDKVLEIATVVTDPHLNIIAEGPVIVIHQSDEVLN
GMDTWNQSTHLKSGLIERVKQSSFDEAHASEATIEFLKKHIAPSKSPMCGNSICQDRRFM
AKHMPNLESYFHYRNLDVSVFKELSRRWRPSLYQGFKKTSKHEALSDIYDSIDELKYYRE
HFLKLS
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcatgatgagttcttcggacgataatttaatttggcttgatatggaaatgagt
ggccttaatactgagaccgataaggtgcttgagatagcaactgtagtcactgatcctcat
ttaaatatcattgcagaaggcccagttattgttattcatcagtcagatgaggtattgaat
ggtatggatacatggaatcaatctacccacttaaaatcaggattgattgaaagggttaag
caatcatcttttgatgaggcccacgcctcagaagcgaccattgagtttttaaaaaaacat
attgcaccaagtaaatcaccgatgtgcggcaattcaatctgccaagatcgacgttttatg
gcaaaacatatgcctaatttagaaagttattttcattacagaaatctagacgtcagtgtt
tttaaagaactttctcgtcgatggagaccttcactctaccaaggttttaaaaaaacaagc
aaacatgaagccttgtcagatatatatgattcaatcgacgaattgaaatattatcgcgag
catttcttaaaattatcttga
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