Candidatus Methylopumilus planktonicus: BN1208_0890
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Entry
BN1208_0890 CDS
T03869
Symbol
der
Name
(GenBank) GTPase involved in ribosome synthesis and maintenance
KO
K03977
GTPase
Organism
mbat
Candidatus Methylopumilus planktonicus
Brite
KEGG Orthology (KO) [BR:
mbat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mbat03009
]
BN1208_0890 (der)
Ribosome biogenesis [BR:
mbat03009
]
Prokaryotic type
GTPases
BN1208_0890 (der)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
RsgA_GTPase
TniB
AIG1
AAA_22
ATP_bind_1
Roc
Ras
cobW
AAA
ABC_tran
AAA_24
AAA_29
SRPRB
SRP54
Motif
Other DBs
NCBI-ProteinID:
CEZ19775
UniProt:
A0A0D6EVM2
LinkDB
All DBs
Position
1:complement(836215..837645)
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AA seq
476 aa
AA seq
DB search
MLPTIALVGRPNVGKSTLFNRLTKSRDALVADLPGLTRDRHYGRGLGGDMPYIVIDTGGF
EPLIEKGIQKEMAKQTLLAIDEADIVFFIVDGRQGVTPHDRVIAELLRKMNRNIYLLVNK
TEGMQRGIATAEFFELGLGDPSGISSAHGEGVRDMIQIALEPFKKEDIEVNEVRQKIPKI
AIVGRPNVGKSTLVNAFLGEDRVIAFDEPGTTRDSIEIEIERNDKNYILIDTAGIRKKGR
VFEAIEKFSVIKTLQAIEEANVAILVVDAEEGITEQDAHVGAYILEAGRALVVAINKWDR
LKEDERDIVKQDIQRKLQFLKFAEFQYVSALKKKGLTEILKSVDEAYRGAFIKMSTPKLT
RALIDTLQQHQPPISKGIRPKLRYAHQGGSNPPVIVIHGNHVNAIKDSYMRFLESAFRQA
FQIIGTPLRVQFKQGENPYLDEEKRKPKEGVVSMRRRKNALRKKLTDKNKLEAKKR
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgttacccaccatagcgcttgtgggccgacctaacgtcggcaaatccactttatttaat
cgtttaactaaatctcgtgatgcgttagtggcagatcttccaggcctaacgcgcgatcgc
cattatggacgaggcttaggaggtgatatgccatacattgtgatcgatacgggtggcttc
gagcccttaatcgaaaaaggcattcaaaaggaaatggcaaaacaaacactgcttgccatt
gatgaagccgatattgttttttttattgtggatggacgtcaaggtgtgactcctcatgat
cgcgtcattgctgaactattacgtaaaatgaatcgtaatatttatcttcttgtgaataaa
acagaaggcatgcaaagaggtattgcgacagctgaattttttgaactaggcttaggcgat
ccctcaggtatttcgtcagcacatggtgaaggtgtgcgagatatgattcagatagcatta
gagccttttaaaaaagaagatattgaagttaatgaggtacgccaaaaaattccaaagatt
gcgattgtaggccgccctaatgtcggcaaatctacattagtcaatgcatttttaggtgaa
gatcgtgtgattgcttttgatgaacccggtacaacgcgcgattctattgaaattgaaatt
gaacgcaatgataaaaattacatacttattgatacagctggcattcgaaagaaaggcagg
gtctttgaagcgatagaaaaattttctgtcattaaaacattacaagctattgaagaggcg
aatgtcgcgattctagtcgtagatgcggaagagggtatcactgaacaagatgcacacgtg
ggcgcttatatcttggaagcaggtcgtgcacttgtggtcgctattaataaatgggatcga
ttaaaagaagatgaaagagacattgtgaaacaagatatacaacgtaaattacaattttta
aaatttgctgaatttcaatacgtatcagccttaaagaaaaaaggactcactgaaatttta
aaatcagtcgacgaggcttatcgtggtgcatttattaaaatgtctacacctaaattaaca
cgtgcccttatagatacattacaacagcatcagccacctatctcaaaaggcattcgtcca
aaattacgttatgcacatcaaggcgggtccaatccacctgtgattgtcattcatgggaat
catgtcaatgccattaaggatagctatatgcgttttttagagagcgcatttagacaagca
tttcaaatcattggtacaccgttaagggtgcaatttaagcaaggggaaaatccttacctg
gatgaagaaaaaaggaagcctaaagagggggttgtgtcgatgcgtcgtcgcaagaatgca
ctgcgtaaaaaactcacagataaaaataaactagaagctaagaaacgctag
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