Candidatus Methylopumilus planktonicus: BN1208_0957
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Entry
BN1208_0957 CDS
T03869
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mbat
Candidatus Methylopumilus planktonicus
Pathway
mbat03030
DNA replication
mbat03430
Mismatch repair
mbat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN1208_0957 (dnaE)
03430 Mismatch repair
BN1208_0957 (dnaE)
03440 Homologous recombination
BN1208_0957 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbat03032
]
BN1208_0957 (dnaE)
03400 DNA repair and recombination proteins [BR:
mbat03400
]
BN1208_0957 (dnaE)
Enzymes [BR:
mbat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN1208_0957 (dnaE)
DNA replication proteins [BR:
mbat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BN1208_0957 (dnaE)
DNA repair and recombination proteins [BR:
mbat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BN1208_0957 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
CEZ19841
UniProt:
A0A0D6EWI7
LinkDB
All DBs
Position
1:complement(906968..910429)
Genome browser
AA seq
1153 aa
AA seq
DB search
MSEAHPVSFVHLRCHSEYSITDGIVRIDDYIDKASSQNMPALALTDLNNVFGLVKFYKAA
REKGIKAILGADLWIENEVNRDQPYRILALCQNDKGYLALSEILTRAYLENQYRGRVEVK
KSWLLEKNEGLIILSGAAMGDVGQAILQEHTDIAMHAMKDWATHFKNRFYIEIQRIAEGD
DKKNEARFINQSLSLATSLEIPVVATHPIQFMDQDDYRAHEARTCIAEGFIMADSRRPKL
FSHEQYFKNEVEMTTLFSDIPEALQNSVEIARRCNFEFTLGKNYLPDFPTPNQEKLEDFL
ISESKKGLEVRLKELFPDEVKRHEVRHDYDARILFETSIINQMGFAGYFLIVADFINWAK
NNEVPVGPGRGSGAGSLVAYSLGVTDLDPIRYQLLFERFLNPDRVSMPDFDIDFCQEGRD
RVIDYVKQKYGAGSVSQIVTFGTMAARAVIRDVGRVLDLPFNFVDGIAKLIPMELGITLE
DALNKEPQLQDRYNKEEEVKELIDLALRLEGVVRNVGMHAGGVLIAPGKISNFTPIYCQA
NGDSLVSQFDKDDIEALGLVKFDFLGLRTLTILAMALKNANILRINENLPPLDLNHLPLD
DKTVFQLLKSANTTAVFQLESRGMKDMLKQAKPDCFEDIVALVALYRPGPMDLIPDFCKR
KHGQQRIVYPHPSTESILKETYGIAVYQEQVMQIAQAVAGYSLGAADLLRRAMGKKKVEE
MDAQREGFIAGSLKNGLNERQARELFDLLEKFAGYGFNKSHAAAYAMVAYQTAYLKTHYP
AAFLAASMSADMNNTDNIQIFFEDCKPNSVELLAPDINQSSFEFIPTNTTQILYGLGAIK
GTGLAAIELILESRESKGPFKNLFDFCARLDLRKVNRRVVESLIRGGAFDTLESNRASLL
ASVNLAITAAEQGKANIAQNSLFGEEQTQKVDMVHMDSWTPQQKLQEEKAALGFYFSGHP
FTFFEKRVRPFIKTQIRELKPQEQPYVIAGVIVAIRIRMTARGKMAIVTLDDAISRVDVV
VGNDLLTQSQRLVQEDQLLIVEGRVSHDDFTGGIRVTARKLFDLSTARNQFAHHLKISCN
GQSDANKLREMLKPYCGHPQHDLKRCRVKIDYHNDLGHAELLLGREWQVDLHDELIDGLT
QWLSEENVKILYN
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagcccatcccgtctcatttgttcatttaaggtgccatagtgaatattccatc
accgatgggattgtgcgcattgatgactacatcgataaggcttcatctcaaaatatgcca
gccttggcgctcacggatttaaataatgtatttggtttggtcaagttttataaggcggcg
cgagaaaaaggtattaaagctattttaggtgctgatctttggattgaaaatgaagtcaac
cgagatcagccttatcgaattctagcgctttgtcaaaacgataaaggctatttagcgtta
tccgaaattttgacgcgtgcctatttagagaatcagtatcgtggtcgcgttgaagtaaaa
aagtcttggttgttagaaaaaaatgaaggtctcatcattctctcaggtgctgctatggga
gatgtcggtcaagccatccttcaagagcatacggatatcgcaatgcatgccatgaaagat
tgggcaacacattttaaaaatcgtttctatattgaaatccaacggattgcagaaggagat
gataaaaaaaatgaagcacgttttatcaatcaatctttgagcttagcgacaagcttagaa
attcctgtggtagccacccaccccatccaatttatggatcaagatgattacagagcccat
gaggcgagaacttgtatcgctgaaggtttcatcatggcagatagccgtcgacccaaatta
ttttcacacgaacagtattttaaaaatgaagtggagatgactactttattcagcgacatc
cctgaagcgctgcaaaattctgtcgagattgcaaggcgttgtaacttcgaatttacctta
ggtaaaaattacttacctgacttcccaacacccaatcaagaaaagctcgaagacttttta
atttcagaatctaaaaaaggattagaagttcgcttaaaagaactttttccagatgaagta
aaacgtcatgaagtcagacatgattatgatgcacgcattctttttgaaacttccatcatt
aaccagatgggttttgcagggtacttcttaatcgttgctgactttattaactgggctaaa
aataatgaagtcccggtaggtcctggtcgaggttcaggggctggatctttggtagcctat
agtttaggtgtgactgatctcgacccaatccgctaccaacttctttttgagcgcttctta
aatcctgatcgtgtgtcgatgccggactttgatatcgacttctgccaagaaggtcgcgat
cgtgtgatcgattatgtcaaacaaaaatatggcgcaggttccgtctcgcaaatagtcact
ttcggtacgatggcagcacgtgctgtgattcgagatgtgggtcgtgttcttgacctccca
tttaattttgtcgatggtattgcgaaactcatccccatggaattagggatcacattagaa
gatgcattaaacaaagaaccacaattacaagatcgttataacaaagaagaagaagtcaaa
gagctgattgatctggcattaaggttagaaggtgtcgtgcgaaacgtcggcatgcacgcg
ggtggcgttttaattgctcccggaaaaatttcaaacttcacaccgatttattgtcaggcg
aatggcgatagtttggtgagtcaattcgacaaagatgacattgaagctctaggtttagtg
aagttcgacttcttaggacttcgcacactcaccattcttgcgatggcattaaagaacgca
aatattttgcggatcaatgaaaatctaccgccacttgatttgaatcatttgccactcgat
gataaaacagtgttccagcttttaaagagtgcaaataccactgccgtcttccagcttgag
tcacgcggtatgaaagacatgttaaaacaagcgaagccagattgctttgaagatattgtc
gcactcgtagcactttatcgtccgggccctatggatttgatccctgacttttgtaaacgt
aaacacggacaacagcgcatcgtctatccccatccctccaccgaatcgatcttaaaagaa
acttacgggattgcggtttatcaagagcaggtgatgcagattgcacaagcggttgcaggt
tactcattgggagcggctgatttacttcgtcgtgcgatgggtaagaaaaaagttgaggag
atggatgcgcagcgcgaaggatttattgcaggctctctaaagaatggattgaatgaaaga
caagcgcgtgaactttttgacttgctcgaaaagtttgcaggctatggttttaataaatca
catgcagcagcgtatgcgatggtggcttaccaaaccgcttacttaaaaacacattatccc
gcagcattcttagccgcttccatgtcggctgatatgaataataccgacaacatccaaata
ttttttgaggattgtaaaccaaatagtgtcgaattattagcacccgatattaatcaaagt
agtttcgaatttattccaaccaatacgacacagatcttatatggattaggtgccatcaaa
ggtaccggcttagccgcgattgaacttattttagagtcgcgcgaaagtaaaggcccattc
aaaaatctttttgatttttgtgcgagacttgatttaagaaaagtgaatcgtcgtgtcgta
gagtctcttatccgcggcggtgcattcgacacacttgaatctaatcgtgcttcattactc
gcaagtgttaatttagccatcaccgcagctgagcaaggaaaagcaaacattgcacaaaat
agtctgtttggcgaagagcaaacgcaaaaagtggatatggtgcatatggactcatggacg
ccccagcaaaaactgcaagaagaaaaagcagcgctcggtttttattttagtggccaccca
ttcaccttctttgaaaagcgtgtgcgaccattcatcaaaactcagatcagagaattaaaa
ccgcaagagcaaccttatgtaattgcaggggtgattgtggcgattcgaattcgcatgaca
gcgcgcggcaaaatggcgattgtcacattagatgatgcgatttctcgcgtagacgtcgtg
gtagggaatgatcttcttacccaatcacaaaggctagttcaagaagatcagcttttaatt
gtcgaaggacgtgtcagtcatgacgacttcacagggggtatcagagtgactgcgcgtaaa
ctttttgatttgtccaccgctcgtaatcaattcgcacaccatttaaagatctcatgtaat
ggtcaatcggatgctaataaattaagagaaatgctaaaaccttactgcggtcatccgcaa
catgacttaaaacgttgccgcgtaaaaattgattaccataatgacctaggtcatgcagaa
cttcttttaggtcgagaatggcaggtggatttgcatgatgaattgatagacggtttaacc
caatggttgagcgaagaaaacgtaaaaatcctttataattaa
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