Candidatus Methylopumilus planktonicus: BN1208_1045
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Entry
BN1208_1045 CDS
T03869
Symbol
waaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
mbat
Candidatus Methylopumilus planktonicus
Pathway
mbat00541
Biosynthesis of various nucleotide sugars
mbat01100
Metabolic pathways
mbat01250
Biosynthesis of nucleotide sugars
Module
mbat_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
mbat00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BN1208_1045 (waaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
mbat01005
]
BN1208_1045 (waaD)
Enzymes [BR:
mbat01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
BN1208_1045 (waaD)
Lipopolysaccharide biosynthesis proteins [BR:
mbat01005
]
Core region
BN1208_1045 (waaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
Phage_T7_Capsid
Motif
Other DBs
NCBI-ProteinID:
CEZ19926
UniProt:
A0A0D6EWR7
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All DBs
Position
1:1004451..1005434
Genome browser
AA seq
327 aa
AA seq
DB search
MIILTGGAGMIGSVIAWHLNSILDKKDIIIVDDIQHPDQRNNLSKRTYIDYLDKDDLFPW
LEKKKEIEAIIHMGAISATTETNFNKLLNQNIRYSQNLWRYAADHGVPFLYASSAATYGG
GEFGYDDNESELRKLSPLNAYGYSKQFFDQWVVQQVTAKEKTPPQWCGFKFFNVYGPNEY
HKDRMASVVFHAFNQLKAEGEIRLFKSDRPDYKDGMQLRDFVYVKDAAAAVLHFLSHKKH
SGIYNVGTGKASSFKALAESLVKSIKGDLNAIKYIDMPNDLKGKYQYFTEANIKKLKDAG
YTKPFHTIEEGIKDYAINYLTKSDTYA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgataatacttacgggtggtgctggcatgattggaagtgtcattgcttggcatcttaat
agcattctcgataaaaaagatatcatcatcgtcgatgatattcagcatccagatcaacgg
aataatttaagcaagcgaacgtatattgattaccttgataaagatgatctttttccttgg
ttggaaaagaaaaaagagattgaagcaatcattcatatgggcgctatcagtgctacaacc
gaaactaattttaataagcttttaaatcaaaatattcgttacagtcaaaatctatggcgc
tatgcagcggatcatggcgtgcctttcctttatgcaagctccgcggctacctatggcgga
ggcgaatttggctatgatgacaatgaatcagagctaaggaaactatcgcctcttaatgct
tacggctattcaaaacaatttttcgaccaatgggtagtgcagcaagtcactgcaaaagaa
aaaacacctcctcaatggtgtggatttaaattttttaatgtctatggtccaaacgaatat
cataaagatagaatggcaagcgttgtatttcatgcatttaatcaacttaaagcagagggt
gaaattagactcttcaagagcgatcgtcccgattataaagatggcatgcaattaagagat
tttgtttatgtaaaagatgcagcagcagctgttttacattttttaagtcacaaaaaacat
tcaggtatctataatgtaggtacaggaaaagcctcaagttttaaagcgcttgcagaatct
cttgtgaaaagtattaagggcgatctaaatgcaattaaatatattgatatgccaaatgat
cttaagggaaaatatcaatactttactgaggctaatataaaaaaactaaaggatgctgga
tatacaaagccttttcatacgattgaagagggtattaaagattacgcaataaattattta
actaaaagtgatacttacgcatga
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