Candidatus Methylopumilus planktonicus: BN1208_1065
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Entry
BN1208_1065 CDS
T03869
Symbol
rpoH
Name
(GenBank) RNA polymerase, sigma 32 (sigma H) factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
mbat
Candidatus Methylopumilus planktonicus
Brite
KEGG Orthology (KO) [BR:
mbat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbat03021
]
BN1208_1065 (rpoH)
Transcription machinery [BR:
mbat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BN1208_1065 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
IF2_N
HTH_10
HTH_3
UCR_14kD
KORA
HTH_11
RNase_J_b_CASP
Death
Motif
Other DBs
NCBI-ProteinID:
CEZ19946
UniProt:
A0A0D6EWU3
LinkDB
All DBs
Position
1:1023794..1024654
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AA seq
286 aa
AA seq
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MTLDLSLSTLGSIDSYDRYMQSIRAIPSLTAEEEMNLGMRLKKSNDLEAAKTLILSHLKL
VVKVARGYSGYGLPQSDLVQEGNIGLMKAVKRFDPERGVRLVSFAIYWIKAEIQEYIVKN
WRLVKTATTKAQRKLFFNLRSMKKTLQPLKSDEINSIAKELNVKPEDVREMEYRFNGNEI
SLDYGSEESEDDVYRPIAYLKDEAPEPSEQMEIEQAENNSLSSLKKALLSLDERSRLILE
ERWLKDKEASTLHELADKLGVSAERIRQIEQSAMKKIKSLLQSNIQ
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgactttagatttaagcttatctacattaggctcaattgatagctacgatcgctatatg
caatccattagagctattccctcgctcactgcggaagaagagatgaatcttggcatgcgc
cttaaaaaatcaaatgatctcgaggctgcgaaaacactgatcttgtcccacctaaaatta
gtagttaaagtagctaggggctattccggttacggactccctcaatcagacttggttcaa
gaaggcaatattggactaatgaaagctgtaaaacgattcgaccctgaaagaggtgtaagg
cttgtgtcttttgcaatctactggattaaagctgaaattcaagaatatattgtaaaaaac
tggcgtttagttaaaacggcaacgacaaaagcgcaacgtaaacttttttttaatttacga
agtatgaagaaaactcttcagcctcttaaatcggatgagattaattcaatcgcaaaagag
cttaatgtcaaacctgaagatgtgcgtgaaatggaatatcgctttaatggtaatgaaatt
tcattagattatggatctgaagaatcagaagatgacgtttacagacccattgcttacctt
aaagatgaggcgcctgagccatcagaacaaatggaaatagaacaagctgaaaataatagt
ctatcttcccttaaaaaagcacttttatcgctcgatgaaagaagtcgtcttattttagaa
gaaagatggcttaaggataaagaggcgtcaactcttcacgagcttgcagataagcttggt
gtttctgctgaaagaattaggcagatcgaacaatcggcaatgaaaaaaattaaatcatta
ctgcaatctaacattcaataa
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