Candidatus Methylopumilus planktonicus: BN1208_1071
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Entry
BN1208_1071 CDS
T03869
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mbat
Candidatus Methylopumilus planktonicus
Pathway
mbat03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mbat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BN1208_1071 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbat03400
]
BN1208_1071 (mutM)
Enzymes [BR:
mbat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BN1208_1071 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BN1208_1071 (mutM)
DNA repair and recombination proteins [BR:
mbat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BN1208_1071 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
CEZ19952
UniProt:
A0A0D6EWF6
LinkDB
All DBs
Position
1:complement(1029384..1030199)
Genome browser
AA seq
271 aa
AA seq
DB search
MPELPEVEITCIGLKPILQKSISNIIIRNPSLRWPIPSHLKKTLPNQKILHIKRRAKYII
IQFEKASLMIHLGMSGRLEILDKETPPEKHDHVDIAFHNSKNILRYTDPRRFGSILWVDG
DIKNHFLISKLGPEPLESLFTRDYLFSKTHNKNSPIKNIIMDSHIVVGVGNIYASESLFK
AGVLPSKLGKDISLSECTKIVKYIKTTLIKAIELGGSSLKDFYNVNGQSGYFQQTYNVYG
MTGKPCRKCKTIIENKKIGQRSSFFCIKCQS
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacttccagaggttgagattacctgcataggtctcaagcctatacttcaaaaa
tctatttcaaatattattattagaaatccatctctaagatggccaatcccttcgcattta
aaaaaaacacttcccaaccaaaaaatactacatataaaaagacgcgctaaatatattatt
attcaatttgaaaaagcatccctcatgattcatttaggcatgtcaggtcgacttgaaatc
ttagataaagagacgccccctgaaaagcatgatcatgttgatattgcgtttcataattca
aaaaatattttaaggtatacagacccaagaagatttggatccatactctgggtggatggg
gatatcaaaaatcattttttaatttcgaagctaggtccagaaccattggaaagcctattc
actagagactatttattttcaaaaacgcataataaaaattcacctattaaaaatatcatt
atggatagccatattgttgtgggtgttggcaatatatatgcaagtgagtcattatttaaa
gctggagtgctgccaagtaaactaggtaaggatatttccctgagcgaatgcacaaagatt
gttaaatatattaagactacattaataaaagcgattgaattaggcggaagctcacttaaa
gatttttataatgtgaatggacagtctggttattttcagcaaacttataatgtgtatgga
atgacgggcaagccttgccgaaagtgcaaaacaattattgaaaataagaaaattggacag
cgctcaagtttcttctgtattaagtgtcagagctaa
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