Candidatus Methylopumilus planktonicus: BN1208_1111
Help
Entry
BN1208_1111 CDS
T03869
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mbat
Candidatus Methylopumilus planktonicus
Brite
KEGG Orthology (KO) [BR:
mbat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbat03400
]
BN1208_1111
Enzymes [BR:
mbat01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BN1208_1111
DNA repair and recombination proteins [BR:
mbat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BN1208_1111
Prokaryotic type
BN1208_1111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
RNase_P_p30
UBA_NBR1_C
Motif
Other DBs
NCBI-ProteinID:
CEZ19992
UniProt:
A0A0D6EWI8
LinkDB
All DBs
Position
1:1065704..1067110
Genome browser
AA seq
468 aa
AA seq
DB search
MNKKYNNSLVWFRRDLRDYDHAALSHALQESKQVFCIFIFDKEILDVLKNKEDRRVEFIW
ESIKELKESLIKKKSDLIVIHSLASEAITRVIDTFKIDAIYINRDYEPHAIKRDEEIRNI
AIKKNVDFYDFKDQVVFEKDEILTALEKPYTVFTPYKNNYLKKLSQTFLPRFDIEPFIEN
LAQFKSDPLLSLEDMGFKKTNLHQIKIHTGMTGGKLLVEDFKERIALYKKTRDFPAIKGV
SYLSVHLRFGTLSIRQLFRLTQESFSEGAETWLNELIWREFYFQILFHRPDVALGRAFKK
DYESIAFENNPDYFKAWTDGQTGFPIVDAAMRQLNQTGFMHNRLRMIAASFLVKDLLVDW
RWGEAYFAEKLIDFDLSANNGGWQWAASTGCDAQPWFRIFNPITQSLRFDPQGKFIKKYV
PELDKFSEGEIHSPWLSQNTNKIDYPKPIVDHAAQRIKALALYKSVKN
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaaaaatataacaactcacttgtttggtttagaagagacttacgtgattacgat
catgcagctctttcccatgcgcttcaagaatctaagcaagttttttgtatttttattttt
gacaaagaaattttagatgtcttaaaaaataaagaagataggcgagtcgaatttatttgg
gaaagtattaaagagcttaaagaaagtctcatcaaaaaaaaatctgatttaattgtaata
catagcttggcttcggaggctattacccgtgtcattgatacatttaagatcgatgcaatc
tatatcaacagagattatgaaccgcacgcgattaaacgagatgaagaaataagaaatatt
gcgattaaaaaaaatgtcgatttttatgattttaaagatcaggtagtttttgaaaaagat
gagattcttacagcgctagaaaaaccctatactgtttttaccccttacaaaaataattac
ttaaaaaaacttagccaaacttttctacctcgcttcgatattgagccttttatcgaaaat
cttgctcaatttaaatccgatccgttactgagtcttgaagatatgggatttaaaaaaacc
aaccttcatcaaattaaaattcatacaggcatgactggaggaaaattactcgttgaagat
tttaaggaaagaatagcgctttacaaaaaaacgcgcgattttccagcgattaaaggtgtt
tcttacctatctgttcatttgcgatttggtacgctttctataaggcaactttttcgttta
acgcaagagtctttcagtgaaggcgctgaaacgtggcttaatgaattgatttggcgggaa
ttttattttcaaattttattccatcgtcccgacgtggcactgggcagagctttcaaaaaa
gactatgaatcgatcgcttttgaaaacaaccctgattactttaaagcatggacagatggc
caaactgggttccctattgtggatgctgcaatgaggcaactcaatcaaacaggctttatg
cataatcgacttagaatgattgccgcctcttttttagtcaaagatctacttgtcgattgg
cgctggggcgaagcgtattttgcagaaaaacttattgattttgacttaagtgctaataat
ggtggctggcaatgggctgcttctaccggttgtgacgctcagccatggtttaggattttt
aacccaattacgcaatctttaagattcgacccccaaggtaaatttattaaaaaatatgtc
cctgagctagataagtttagtgagggtgagattcactcaccatggctcagtcaaaacacc
aataaaatcgactacccaaagcctatcgttgaccatgctgcacagaggattaaagctcta
gccctctataagtctgttaaaaactag
DBGET
integrated database retrieval system
