Candidatus Methylopumilus planktonicus: BN1208_1135
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Entry
BN1208_1135 CDS
T03869
Symbol
clpA
Name
(GenBank) ATP-binding protease component
KO
K03694
ATP-dependent Clp protease ATP-binding subunit ClpA
Organism
mbat
Candidatus Methylopumilus planktonicus
Brite
KEGG Orthology (KO) [BR:
mbat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
mbat03110
]
BN1208_1135 (clpA)
Chaperones and folding catalysts [BR:
mbat03110
]
Heat shock proteins
HSP100
BN1208_1135 (clpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
AAA_lid_9
ClpB_D2-small
AAA_5
AAA_16
AAA_22
Clp_N
Sigma54_activat
TniB
Mg_chelatase
AAA_7
nSTAND3
RuvB_N
AAA_14
AAA_18
TIP49
AAA_3
IstB_IS21
ResIII
TsaE
bpMoxR
AAA_33
AAA_6
NACHT
AAA_28
AAA_8
Torsin
AAA_30
NB-ARC
T2SSE
Motif
Other DBs
NCBI-ProteinID:
CEZ20016
UniProt:
A0A0D6EX10
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All DBs
Position
1:1090674..1092941
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AA seq
755 aa
AA seq
DB search
MIAQELEVSLHMAFMDARQKRHELITVEHLLLAMLDNPSAAEVLKACGSNVEILRNELTQ
YIDEHTPTISGEDEVDTQPTLGFQRVIQRAMLHVQSSGKKEVNGANVLVAIYGEKDSHAV
YFLHQQGVTRLDVVNFIAHGVSKLNEGETPKPSTEQESDQESSSSKALETYTVNLNKMVL
AGKIDPLIGRDSEIERVIQTLCRRRKNNPLLVGEAGVGKTAIAEGLAKRIVDKEVPTILE
GTTIFSLDMGTLLAGTKYRGDFEQRLKSVMKQLNEHKDAILFIDEIHTLIGAGSASGGTL
DASNLLKPALSNGTIKCIGATTYQEYRMVFEKDHALARRFQKIDVNEPSILDTINILKGL
KTRFEKHHNVKYSVAAIHSAAELSAKYINDRHLPDKAIDVIDEAGAAQRILPKNKQKKVI
TNKEIEEVVAKIAKIPPKNISNDDKHALKNLERDLKAVIFGQDKAIENLSSAIKMTRSGL
GVPNKPIGNFLFSGPTGVGKTEVARQLAYILGIELVRIDMSEYMERHAVSRLIGAPPGYV
GFEQGGLMTEAVNKQPYCVLLLDEIEKAHPDIFNILLQVMDHGSLTDSNGRKTDFRNVTL
IMTTNAGAESLSKTSMGFTQSKKMGDEQAEIKRLFTPEFRNRLDATVSFAPLSHDVILKV
VDKFLMQLEDQLHEKKVDATFTESLKSYLAKNGFDPSMGARPMSRLIQDTIRKALADELL
FGKLTNGGNVIIDIDSNDKVKLIFEEENKAILQES
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgatagctcaagaactcgaagtaagcctgcatatggcatttatggatgcaagacaaaag
cgtcacgaacttattacggttgaacatttgcttcttgctatgcttgataatccttctgca
gcagaagtacttaaagcctgcggctcaaatgttgaaattctcagaaatgaattaactcaa
tatatcgacgaacatacgccaactatatctggcgaggatgaagttgatacacagcccacg
cttggatttcaaagagtcattcaaagagcaatgcttcatgtgcaatcctctggcaaaaaa
gaagtcaatggagcaaatgtattagttgcaatttatggcgaaaaagattcacatgcagtt
tactttcttcatcagcaaggtgtaacacgccttgatgtcgttaattttattgcgcatgga
gtatctaaattaaatgagggtgaaactcctaaaccatctacagaacaagaaagtgatcaa
gaatcatccagtagcaaagctctagaaacttacacggttaatcttaataagatggtttta
gccgggaaaattgaccctctgattggtcgagattcagaaattgagcgagtcatccaaact
ctctgcagaagaagaaaaaacaatcctcttttggtaggtgaagccggtgttggaaagact
gcaattgctgaaggacttgcaaaaagaattgtagacaaggaagtgcctaccatcctagaa
gggacaaccatattctcgctcgatatgggcacattgttagcaggcacgaaataccgggga
gattttgagcaaagactcaaatctgtgatgaagcaactcaatgaacataaagatgctatt
ttatttattgatgaaattcacacgctcataggggctggatctgcaagcggaggaacgctc
gatgcatctaacctacttaaaccagcattatcaaacggaactattaaatgtattggtgcg
acgacttatcaagaatatagaatggttttcgaaaaagatcatgcgctcgcaagaagattt
caaaaaattgatgttaatgagccaagcattcttgatacgattaatattcttaaaggcctt
aaaactaggtttgaaaaacatcacaacgtaaagtattctgttgcagcaattcatagtgca
gccgaactttctgcaaaatatattaatgataggcatcttcctgataaagcgattgatgtc
attgatgaggcaggtgctgctcagagaatacttccaaaaaataaacagaagaaagtaatc
actaataaagaaattgaagaagtcgtagctaagattgctaagatccctccaaaaaatatt
tccaatgacgataagcatgctctaaaaaatctcgagcgcgatcttaaagcagttattttt
ggtcaagataaagcgattgaaaatttatctagcgctataaaaatgacaagaagtggattg
ggcgttccaaataagcctataggtaatttcctttttagcggaccaacaggtgttggaaaa
acagaggtagctcgccaactggcttacatcctagggattgaactcgttcgtatcgatatg
agtgagtatatggaaaggcatgcagtatcaagacttattggggctccaccaggttatgtt
ggattcgagcaaggtggcttaatgacggaagctgtcaataaacaaccttattgcgttctt
cttcttgatgagattgaaaaagcgcaccctgatatctttaatattctcctacaagtgatg
gatcatggatctttaacagacagtaacggtagaaaaacagactttagaaacgttaccctg
attatgacaaccaatgctggtgcagagtctttatcaaaaacttctatgggatttacacag
tctaaaaaaatgggtgacgagcaagcggaaatcaaacgcttatttacccctgaatttaga
aatagacttgatgcaactgtatcattcgcgcctctcagtcatgatgtcattttaaaagtt
gtcgacaaattcctgatgcagcttgaagatcagttacatgagaaaaaagtagacgcaact
ttcacggagtctctcaaatcatacctagccaaaaacggctttgatccgagtatgggagca
agacccatgtctcgcctcattcaagatacaatcagaaaggcccttgcagatgaactactc
tttggtaagctcactaatggtggcaatgtaatcattgatattgatagcaatgacaaagtg
aaattaattttcgaagaagaaaataaagccattcttcaagagtcttaa
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