Candidatus Methylopumilus planktonicus: BN1208_1174
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Entry
BN1208_1174 CDS
T03869
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
mbat
Candidatus Methylopumilus planktonicus
Pathway
mbat00470
D-Amino acid metabolism
mbat00550
Peptidoglycan biosynthesis
mbat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mbat00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BN1208_1174 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BN1208_1174 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mbat01011
]
BN1208_1174 (murD)
Enzymes [BR:
mbat01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
BN1208_1174 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
mbat01011
]
Precursor biosynthesis
Amino acid ligase
BN1208_1174 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
NAD_binding_7
Shikimate_DH
TrkA_N
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
CEZ20055
UniProt:
A0A0D6EWF9
LinkDB
All DBs
Position
1:complement(1133580..1134929)
Genome browser
AA seq
449 aa
AA seq
DB search
MSINFNKKKILVVGLGDTGQSVLHFLANKECDIQAIDTRLAIDNFDEIKEKFKDVKFSIG
EKFNDGIINDVELIIISPGVSLRESYIQTALNRGIPVIGDIEIFALAKPVSSKVIGITGS
NGKTTVTSLVGDLLKAAGISAIVGGNIGIPILNTLNQKAPEAYVLELSSYQLETTYSLAL
EAAVVLNISEDHMDRYGSIEEYAKAKYRIFNHAKNTIINRDDDYLKSKINESSVTFGNHL
DEKNYGIKKNGNQYFIAKGNAEIISLDEIKLKGAHNILNIMAALALCEPFMISKDVIKKV
LSQFKAPPHRVEFINSISGIDFYNDSKGTNVGATIAAIQSMTKPILLIAGGDGKSQNFKP
LIGPSKGKVKNITLIGKDAKIMQEVFSGSAIPTNVEKNLESAIIKSYELAEAGDVVLLSP
ACASTDMFKNYVHRGEVFKDCVSKLKNKS
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcaattttaataaaaagaaaattctggtagttggtcttggagacacaggccaa
tctgtcttacattttttagcgaacaaagaatgtgatattcaagctattgatacaagacta
gctattgataattttgatgaaataaaagaaaaatttaaagatgttaaattttctattgga
gaaaaatttaacgatggcatcattaatgatgttgaattaattattattagcccaggcgtg
tcattgagagaaagttatatacaaacggctctgaatcgaggcatacctgtaattggcgat
attgaaatctttgcgctagccaaaccggtgagttcaaaagtgattggtattacaggatca
aatggtaaaacgaccgttacatctcttgtgggagatttattgaaagcagctggtatatca
gctattgtcgggggaaatattgggatccccatattaaataccttaaatcaaaaagcgcca
gaggcatatgttcttgaactttctagttatcaactagaaacgacatattcattagcgctt
gaagcagcagtagtcttaaatatttcggaagatcatatggatcgatacggatcaatcgaa
gagtatgccaaagcaaaatatagaatatttaatcatgctaaaaatacgatcataaataga
gatgatgattatcttaaatctaaaattaatgaaagctcggtgacatttggaaatcatttg
gacgagaaaaattatggtattaaaaaaaatgggaatcaatatttcatcgcaaaaggcaat
gctgaaattatttccttagatgaaattaaactaaagggcgcacataatattctaaatata
atggctgctttagcgctttgtgagccatttatgatttcaaaagatgtgattaaaaaagta
ctaagtcaatttaaggcaccgcctcatcgagttgaatttattaactctatatcaggaatt
gatttttataatgattcaaaaggcaccaacgttggagctacaattgccgcaattcaaagc
atgactaaaccaatcctacttattgccggaggagatggaaaaagtcagaattttaaacca
ctaattggcccgtctaaaggtaaagttaaaaatattacattgattggtaaagacgcaaaa
ataatgcaagaggtatttagcggcagtgccattccgacaaatgttgaaaaaaatcttgaa
tcagcaattatcaaatcgtatgagttagctgaagcaggagatgtagttctcctttcccca
gcatgtgcaagtacagatatgtttaaaaattatgtacatcgcggagaagtttttaaagat
tgtgtgagtaagttaaaaaataaatcatga
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