Candidatus Methylopumilus planktonicus: BN1208_1192
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Entry
BN1208_1192 CDS
T03869
Symbol
fdhA
Name
(GenBank) Formate dehydrogenase, alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
mbat
Candidatus Methylopumilus planktonicus
Pathway
mbat00630
Glyoxylate and dicarboxylate metabolism
mbat00680
Methane metabolism
mbat01100
Metabolic pathways
mbat01120
Microbial metabolism in diverse environments
mbat01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
mbat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BN1208_1192 (fdhA)
09102 Energy metabolism
00680 Methane metabolism
BN1208_1192 (fdhA)
Enzymes [BR:
mbat01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
BN1208_1192 (fdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
NADH-G_4Fe-4S_3
Fer4_7
Fer4_10
Fer4
Fer4_21
Fer4_9
Fer4_6
Fer4_8
Fer4_2
Fer4_15
Fer4_16
Fer4_4
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
CEZ20072
UniProt:
A0A0D6EWR4
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All DBs
Position
1:complement(1150267..1153113)
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AA seq
948 aa
AA seq
DB search
MDDVKDFGTPKRTSDKTIQLTIDGVSVSVPEGTSIMHAASISGVTVPKLCATDNLEPFGS
CRLCLVEIEGRRGYPASCTTPVAEGIRVRTQTPKLADIRRGVMELYISDHPLDCLTCATN
GDCELQDMAGAVGLRDVRYGYEGKNHLKSEKDTSNPYFTFDPSKCIVCSRCVRACEEVQG
TYALTIQGRGFDSKVSAGNKDFKDSECVSCGACVQACPTATLIENTIIEAGVPEHSVTTT
CAYCGVGCSFHAEMKGEEVVRMTPNKDGGANHGHSCVKGRFAWGYATHKDRITTPMIRKS
IHDPWEKVTWDVAINYAASEMQRIQKKYGRDSVGAISSSRCTNEEVYVVQKLVRAALGNN
NIDTCARVCHSPTGYGLKQTLGESAGTQNFDSVMHSDVIMIIGANPTDGHPVFASQMKRR
LREGAKLIIVDPRAIDLVDSSPHIKADYHLKLKPGSNVAIVNALAHTIVTEKLMDDSFIK
SRCEDDAFKAWKDFIIKPENSPEAMSEFTGVDAKDVRAAAKLFAKGGNAAIYYGLGVTEH
SQGSTMVMGIANLAMLTGNIGREGVGVNPLRGQNNVQGACDMGSFPHEFPGYRHISDKAT
LALFEKAWDVKLQNEPGLRIPNMLDVAIEGQFKALYCEGEDIAQSDPNTQHVTHALESME
CVIVQDLFLNETAMYAHVFLPGSSFLEKNGTFTNAERRISRVRKVMSPKNGYEDWEITQM
LSNALGYKMDYSHASDIMDEIANLTPTFSGVSYKKLDELGSIQWPCNDEHPLGTPTMHID
EFVRGKGKFIITEYVPTSEKVTPKYPLILTTGRILSQYNVGAQTRRTKNTAWHEEDLVEI
HPHDAEERAIKSGDWVGVVSRSGETVLRAQITDRVQPGVIYTTFHHPESGANVITTDNSD
WATNCPEFKVTAVQVNKVTQLSDWQKQYQHFSEEQIEFAGKSKELKIH
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgtaaaagattttggaacgcccaaaagaacttcagacaagactattcagtta
accattgatggcgtatctgtctcggtgcctgaagggacgtccatcatgcatgcagcctct
atttcaggggtcactgtgcctaagttatgtgctacagacaacctggaaccctttggctca
tgtcgtctttgcttggtcgaaattgaaggtcgtcgcggttatccagcctcatgcactacg
cctgttgctgaaggtattagggtacgtacacaaacgcctaaacttgctgatattagacgc
ggtgttatggagctctatatttcagaccatcccttggattgtttaacttgtgcaacaaat
ggtgactgtgaacttcaagacatggctggcgctgtcggtttaagagatgtacgttatggc
tacgaaggtaaaaatcatttaaagagtgaaaaagatacttcgaatccatattttactttt
gatccgtctaaatgcattgtatgttcaagatgtgttagagcatgtgaagaagttcaaggt
acttatgccctcaccattcaaggtcgaggttttgattccaaagtatcagccggtaataaa
gattttaaagattcagaatgcgtctcatgcggcgcatgtgtgcaagcgtgcccaacggca
acccttattgaaaatacgattatcgaagcaggcgttccagaacatagcgtcacaacaact
tgtgcatactgcggtgtaggctgctcatttcatgctgaaatgaaaggcgaagaagtagtt
cgtatgacacccaataaagatggcggtgctaatcatggacattcgtgtgttaagggaaga
tttgcttggggatacgcgacacataaagatcgcattacgacacctatgattcgtaaaagt
attcatgatccttgggaaaaagtcacatgggatgtagctataaattatgcagcaagtgaa
atgcagcgtatccaaaagaaatatggacgtgattcagtaggtgctatctcatcttcacgt
tgtacgaatgaagaagtttatgtagtgcaaaaattagtccgtgcagcattaggtaataat
aatattgatacttgcgcacgtgtatgccattcacctacaggttacggacttaagcaaaca
cttggcgagtctgcaggtacgcaaaattttgattcagttatgcattcggatgtgattatg
attattggggctaacccaacagatggccatcctgtatttgcatcacaaatgaaaagacgc
ttaagagaaggtgccaagcttatcattgttgatcctcgcgctattgatcttgtcgatagc
tcgcctcacattaaagctgattatcatttaaaacttaagcctggctccaacgttgctatc
gtgaatgcattagctcacacgattgtcactgaaaaactcatggatgattctttcattaaa
tcgcgttgtgaagacgatgcatttaaagcatggaaagattttattattaagcctgaaaat
tcacctgaagcgatgagtgaatttactggtgtggatgctaaagatgtaagggctgctgca
aaactttttgctaaaggtggtaatgctgcgatttattatggattaggcgtgactgaacat
agccaaggttcaacgatggtcatgggcattgctaatcttgctatgttgacaggtaacatt
ggccgagagggtgtaggagttaaccctttaagaggacaaaataatgtacaaggcgcttgc
gacatgggatcgtttcctcatgaattcccaggttaccgacatatatctgataaagcgact
ttggctctatttgaaaaagcttgggatgttaaattacaaaatgaacccggtttaagaatt
cctaatatgttagatgtcgcgatcgaaggacaatttaaagcgctctattgtgaaggcgaa
gacatcgcacaatcagatcctaatacgcagcatgtaacacatgcattggagtcgatggag
tgtgtcattgtgcaagatttatttttaaatgaaactgcgatgtatgcgcacgtattctta
ccaggctcttcattcctagaaaagaatggcacatttacaaatgctgaaagacgtatttct
agagtgagaaaagtaatgtcccctaagaatggatatgaagattgggagatcacacagatg
ctttctaatgcgctaggttacaaaatggactatagccacgcatcagacatcatggatgag
attgcaaatctcacgccgacatttagcggtgtgagttataagaagttagatgaattagga
agtattcaatggccttgtaatgatgagcatcctctcggtacaccgacaatgcatattgat
gaatttgtgcgcggcaaaggtaaatttattattactgaatatgtgcccacttcagaaaaa
gtgacaccaaaatatccacttattctaacgacgggcagaatactctctcaatataatgta
ggtgctcagacgagaagaacaaaaaatacagcgtggcatgaagaagatttagttgaaatt
cacccacatgatgctgaagaaagagctattaaatcaggcgattgggttggtgttgtgagt
cgatcaggcgagactgtattaagggctcaaattacagaccgtgttcaacctggcgtgatt
tacactacattccatcatcctgaatcaggtgctaacgtcatcacgactgataattcagat
tgggcaacaaactgccctgaatttaaagtgacagctgtgcaggtaaataaagtgacacaa
ttatctgattggcaaaaacaataccaacattttagtgaagagcaaattgaatttgcaggt
aaatctaaagaattaaaaattcattag
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