Candidatus Methylopumilus planktonicus: BN1208_1193
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Entry
BN1208_1193 CDS
T03869
Symbol
fdhB
Name
(GenBank) formate dehydrogenase beta subunit; NADH:ubiquinone oxidoreductase, chain F
KO
K00124
formate dehydrogenase iron-sulfur subunit
Organism
mbat
Candidatus Methylopumilus planktonicus
Pathway
mbat00630
Glyoxylate and dicarboxylate metabolism
mbat00680
Methane metabolism
mbat01100
Metabolic pathways
mbat01120
Microbial metabolism in diverse environments
mbat01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
mbat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BN1208_1193 (fdhB)
09102 Energy metabolism
00680 Methane metabolism
BN1208_1193 (fdhB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Complex1_51K
NADH_4Fe-4S
SLBB_2
SLBB
Motif
Other DBs
NCBI-ProteinID:
CEZ20073
UniProt:
A0A0D6EXU0
LinkDB
All DBs
Position
1:complement(1153153..1154706)
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AA seq
517 aa
AA seq
DB search
MSIKIFVSKDSAALSLGADQVAAEIAKEAQARKLDIQIVRNSSRGLFWLETLVELETVQG
RIGFGPINPNEVKSLFDADFIKGGKHPLALGLVSEIDWLKKQERLTFARMGITEPTSIDQ
YIEHDGFEGLKNALNLDPQAIVQTVTDSGLRGRGGAAFPTGIKWKTVLDTKATQKYIVCN
ADEGDSGTYSDRMIMEGDPFVLIEGMIIAGLAVGASQGYIYLRSEYPHALKTLNEAIEKA
KSAGYLGDDILKSGHVFHLEVRRAAGAYICGEETSLLESLEGKRGLVRFKPPLPAIEGLF
GKPTAVNNVISLATIPIILAKGAKYYQDFGMGKSRGTLPIQLAGNLKRTGLVEKAFGVTL
RELLYDFGGGSLSGKPIKAVQVGGPLGAYLPESQFDTPLDYEKFSEIWAILGHGGIVAFD
ETVNMAKMARYAFDFCAIESCGKCTPCRVGSTRGVEVMDHILAGKDVEKHTTLIRDLSDT
MFNGSLCGLGGMTPYPVLSALNHFPKDFGVDVKQTKA
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgagcattaaaattttcgtatcgaaagattccgcagcattatctcttggcgcagatcaa
gttgcagcagagatagcaaaagaagcccaagctagaaaactagatattcaaatcgtacga
aatagttcacgtggattattttggttagaaacattggttgaattagaaacagttcaaggt
cgcataggttttggccctatcaatccaaatgaagtgaaatcattatttgacgcagatttt
attaaaggtggtaagcatcctcttgcattaggtcttgtatcagaaatcgattggttaaaa
aaacaagaacgcttaacttttgcacgcatgggtattactgaacccaccagtattgatcaa
tacattgagcatgacggatttgaaggtttaaaaaatgcactgaatttagatccacaagcg
attgttcaaacagtgacagattctggtttgcgaggccgaggtggcgctgcttttccgacg
ggtattaaatggaaaacagtcttagataccaaagcgacacaaaaatatattgtctgtaat
gcagatgaaggtgattctggaacctattcagatcggatgattatggaaggcgatcctttc
gtgctcattgaagggatgatcattgcaggcctcgctgtaggtgcttcacaaggttatatc
tatttacgttctgaatatcctcacgcattaaaaactttaaatgaagctatagaaaaagct
aaaagcgcaggttatttaggtgatgatattttaaagagtggccatgtatttcatttagaa
gtcagacgagcagcaggcgcatatatttgtggcgaagaaacttcgctgctagaaagtttg
gaaggcaaaagaggactggttagatttaaaccacccctccctgcaatcgaaggtttattc
ggtaagcctaccgcagtcaataacgtgatttcattagccactattccgattattttggcg
aagggtgctaagtattaccaagattttggtatgggcaaatctcgaggcacacttcctatt
cagctcgccggtaatttaaaaaggacagggcttgttgaaaaagcttttggtgtcacctta
agagaacttttatatgattttggtggggggtctttatcaggcaagccaattaaagcagtg
caagttggcggacctttgggcgcttatttgcccgagtctcaatttgatacgccactcgac
tatgaaaaattttctgaaatttgggccattttaggccatggcggtattgtggcgtttgac
gagacagtcaatatggcaaagatggcgcgttatgcctttgatttttgtgcaattgaatct
tgcggaaaatgtaccccttgtcgcgtaggttccactcgtggcgtggaagtgatggaccat
atcctcgcgggtaaagatgttgaaaaacatactacattaattcgagacctttcagacacg
atgtttaatggctctttatgtgggttaggcgggatgacgccttaccctgtgttaagtgct
ttaaatcatttccctaaagactttggggttgatgtaaaacagaccaaggcatag
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