Candidatus Methylopumilus planktonicus: BN1208_1257
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Entry
BN1208_1257 CDS
T03869
Symbol
ruvA
Name
(GenBank) component of RuvABC resolvasome, regulatory subunit
KO
K03550
holliday junction DNA helicase RuvA
Organism
mbat
Candidatus Methylopumilus planktonicus
Pathway
mbat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BN1208_1257 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbat03400
]
BN1208_1257 (ruvA)
DNA repair and recombination proteins [BR:
mbat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BN1208_1257 (ruvA)
RecFOR pathway proteins
BN1208_1257 (ruvA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
IMS_HHH
5_3_exonuc
Transposase_20
HHH_8
SAM_SMF
DUF3701
Motif
Other DBs
NCBI-ProteinID:
CEZ20137
UniProt:
A0A0D6EWX8
LinkDB
All DBs
Position
1:complement(1209622..1210203)
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AA seq
193 aa
AA seq
DB search
MIGRISGILLDKTPPLALIDCNGVGYECEVPMSTFYLLPQVGDKVTLLTHFVVREDAQLL
FGFGTNQERLMFRQLLKVNGIGAKSALAILSGLSIDELIQAVSLQEAGLLTRVPGIGKKT
AERLLLELKDKFTLDSALSIKGSGITSISQDVLNALIALGYNERESLNAVKSLDMNLTVN
DGIKQALKYLSKG
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgattggaagaatttccggcattcttttagataaaacgccacctttggctttaattgac
tgcaatggagtgggctatgaatgcgaagtccctatgagtactttttatttacttcctcag
gtgggagataaagtcacattactcacgcactttgtcgttcgtgaagatgcacagctttta
tttggttttggtaccaaccaagaacgtttaatgtttcgacagcttttgaaagtaaacggt
attggagctaagtccgcactcgcgattttaagcggtttatcgattgatgaattgattcaa
gcggtgtcattgcaagaagcagggctcctaacccgtgtacccggtatcggcaaaaaaaca
gccgaacgattgcttctagagcttaaagataaattcacgcttgattcagcgctaagtatt
aagggttctggtatcacatcgatcagccaagatgttctcaatgcgctcattgcattaggc
tacaatgaacgcgaatctttaaatgcagtcaaaagtttagatatgaatctcactgtgaat
gatggtattaaacaagctttaaaatatttatctaaaggctaa
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