Candidatus Methylopumilus planktonicus: BN1208_1324
Help
Entry
BN1208_1324 CDS
T03869
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mbat
Candidatus Methylopumilus planktonicus
Pathway
mbat00300
Lysine biosynthesis
mbat00470
D-Amino acid metabolism
mbat01100
Metabolic pathways
mbat01110
Biosynthesis of secondary metabolites
mbat01120
Microbial metabolism in diverse environments
mbat01230
Biosynthesis of amino acids
Module
mbat_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mbat00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BN1208_1324 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BN1208_1324 (lysA)
Enzymes [BR:
mbat01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BN1208_1324 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Exo70_N
Motif
Other DBs
NCBI-ProteinID:
CEZ20204
UniProt:
A0A0D6EXL2
LinkDB
All DBs
Position
1:1271261..1272517
Genome browser
AA seq
418 aa
AA seq
DB search
MGQTSFIHPAQGVLFAEGISLEAIAKEFGTPTYVYSKNTLIQTFESFKKGLLKTDHLICF
AVKANSNIAILNLFASLGAGFDIVSGGELERVIYAGGDPQKIVFSGVGKTESEIVAALKA
NILCFNVESRSELIRIQEVAEKINIRASISIRVNPDVDAKTHPYISTGLKDNKFGVDFNQ
ALSLYLDAKSMSYIDIKGIDCHIGSQIIELNPFIDALDRVLSLVDQLKKNNIHLSHIDIG
GGIGICYQDESPPDFEIYIKEILNKIKDLNVKIIFEPGRALVGNAGVLLSKVEYLKQNDI
KHFAIIDAAMNDLMRPTLYDAYHAIKLVREHDAKPQLFDVVGPVCESGDFIAKNRSLTLK
ENDLICIMSAGAYGMSMSSNYNSRGRAAEVMVDQDKLYEIRTREKSSDLFKLEKKLPL
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgggccaaacgtcattcattcatcctgcccaaggtgtcctttttgcagagggcatttca
cttgaagccattgcgaaagaatttggtacgcccacttatgtttattccaaaaatacgctg
attcaaacttttgagtcttttaaaaaaggccttctcaagacggatcatcttatatgtttt
gcagtgaaagctaactctaatatcgcgattcttaatctctttgcaagcttaggtgcaggc
tttgatattgtgtcgggcggtgaacttgagcgcgtcatttatgctggtggtgatccacaa
aaaattgttttctcaggtgtaggcaaaactgaatctgaaattgttgccgctttaaaagcg
aatatattatgtttcaatgtggaatctagaagcgaacttattcgcattcaagaagttgca
gagaaaataaatatcagggcatctatctctattcgtgtcaatccggatgtggatgccaaa
actcacccttacatttcaacaggattaaaagacaacaaatttggtgtcgattttaatcaa
gcgctttcactctatcttgatgcaaaaagtatgagttatattgatattaaaggcattgat
tgtcatattggctcacagattatagaacttaacccttttatagatgcactggatcgcgta
ctttctcttgtagatcaacttaaaaaaaataatattcatttaagtcatattgatattggc
ggcggtattgggatttgttaccaagatgaatctcctcctgactttgaaatttatataaaa
gaaatcttaaataagattaaagaccttaatgtcaaaattattttcgaacctggtcgagcg
cttgtgggtaacgcaggtgtacttttatctaaagtagaatatttaaaacaaaatgatatc
aaacactttgccatcattgacgctgccatgaatgatctcatgaggcctactttatatgac
gcttatcatgcaattaaattggttcgcgaacatgatgcgaaacctcaattgtttgatgtt
gtaggtccagtttgtgaaagtggtgactttattgcaaaaaatcgatctttgacattaaaa
gaaaatgatcttatttgtataatgtcggctggagcttatggcatgagtatgagttcaaat
tacaattcacgtgggcgcgcagcggaagtcatggtagatcaagataagctttatgaaatt
agaacacgtgaaaaatcgagcgacttatttaagctcgaaaagaagctaccgctttaa
DBGET
integrated database retrieval system