Candidatus Methylopumilus planktonicus: BN1208_1353
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Entry
BN1208_1353 CDS
T03869
Symbol
thiC
Name
(GenBank) hydroxymethylpyrimidine moiety synthesis in thiamin biosynthesis
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
mbat
Candidatus Methylopumilus planktonicus
Pathway
mbat00730
Thiamine metabolism
mbat01100
Metabolic pathways
mbat01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
mbat00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
BN1208_1353 (thiC)
Enzymes [BR:
mbat01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
BN1208_1353 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
CEZ20233
UniProt:
A0A0D6EY99
LinkDB
All DBs
Position
1:1298672..1300567
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AA seq
631 aa
AA seq
DB search
MNATDKQLKKNIDQFLNETASLDPEALKSFAKSKKVYITGSRPDLKVPFREISLSDTPSS
FGAEKNPPVMVYDTSGPYTDPDYQIDIRNGLPSLRSQWIEERDDTEFLEGPTSIFGHERK
TNPELAKMRFNLLRQPRRAKIGKNVSQMHYAKQGIVTPEMEYIAIRENQRREDMSALLQT
QHPGHDFGAAIPKQITPEFVRDEVARGRAIIPANINHPETEPMIIGRNFLVKINANIGNS
ALGSSISEEVEKMVWGTRWGADTVMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKV
DGKAEDLTWEIFKDTLIEQAEQGVDYFTIHAGVKLSYIPMTAKRMTGIVSRGGSIMAKWC
LAHHEESFLYTHFEEICEIMKAYDVSFSLGDGLRPGSIYDANDEAQFAELKTLGELTQIA
WKHDVQCMIEGPGHVPMHLIKENMDLQLEHCGEAPFYTLGPLTTDIAPGYDHITSGIGAA
MIGWYGCAMLCYVTPKEHLGLPDKEDVRVGIITYKIAAHAADLAKGHPGAQIRDNALSKA
RFEFRWEDQFNLGLDPEKAKEFHDETLPQEGAKQAHFCSMCGPHFCSMKITQDVRDYAAA
KGMKEDEALKKGMEEKSIEFIKKGVEIYQKT
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgaccgacaaacaattaaaaaaaaatattgatcaatttttaaacgaaacagcg
tcactcgatcctgaagcgctcaaatcttttgcaaaatcaaaaaaggtctacatcacaggt
tcgcgtcctgatttaaaagttccttttagagaaatatctttatcggataccccttcatct
tttggtgctgaaaaaaacccaccggtcatggtctatgacacttcaggcccttataccgac
cctgattatcaaattgatattcgtaatggacttccctcattaagatctcaatggattgaa
gaaagagatgacactgaatttttagaaggtcctacatctatcttcggacatgaacgcaag
acaaatcctgagctcgccaaaatgcgtttcaatttattaagacaaccacgacgcgctaag
ataggtaaaaatgtgtcgcaaatgcattacgctaaacaagggattgtcacacccgaaatg
gaatatattgccattcgagaaaatcaaagacgtgaagacatgtctgctttattacaaaca
caacatccaggtcatgattttggcgcagccattcccaaacagatcacaccagagtttgta
agagatgaagtggctcggggtcgcgctatcattcctgccaacattaatcatcctgaaaca
gagcccatgattattggtcgtaattttttagtgaaaattaatgccaacatcggtaattct
gcactaggctctagtatcagtgaggaagttgaaaaaatggtgtgggggacacgttggggt
gcagataccgtgatggatttatccacgggaaaaaacattcatgaaacacgtgagtggatt
attcgtaatagtcccgtaccgattggaaccgtccccatttatcaagcgctcgaaaaagta
gatggcaaagctgaagatctgacttgggaaatttttaaagacacactcatcgaacaagca
gaacaaggtgtcgattattttacgattcatgcgggcgtgaaattaagttatataccgatg
acggcaaaacgtatgacgggtattgtgagtcgcggtgggtcaattatggcgaaatggtgt
ttagcacatcacgaagaatcattcctttacacacacttcgaagagatttgcgaaatcatg
aaagcttatgatgtcagctttagtttaggggatggcttaagacctggctccatttatgac
gcaaatgatgaagcccagtttgcagaacttaaaactttaggcgagcttacacaaattgca
tggaaacatgacgtgcaatgcatgattgaaggcccaggacatgtgccgatgcacctcatt
aaagaaaatatggatcttcaacttgaacattgcggcgaagctcctttttatacattgggc
ccgcttaccaccgacattgctccaggttacgatcacatcacatccggcattggtgctgcg
atgattggttggtatggatgtgcaatgttgtgttacgtcacacctaaagaacatctaggt
ttacctgataaagaagatgtcagagtaggcatcatcacttataagattgcagcgcatgcg
gccgatcttgctaaaggtcatccaggcgcacaaatccgtgacaatgctttatcgaaagca
cgtttcgagttccgctgggaagatcagtttaatttaggtttagatccggaaaaagcaaaa
gaattccacgatgaaaccttgccgcaagaaggcgctaaacaagcacacttttgctccatg
tgtggtccgcatttctgttccatgaaaatcacacaagacgtaagagactatgcagcagca
aaaggtatgaaagaagatgaggccttgaaaaaaggtatggaagaaaaatccattgagttc
attaagaagggcgttgaaatctaccaaaaaacttaa
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